Evidence map›Paper›PMID 38732368›Full record

ArticleDiagnostics (Basel, Switzerland)2024

A Neoteric Feature Extraction Technique to Predict the Survival of Gastric Cancer Patients.

Warid Islam, Neman Abdoli, Tasfiq E Alam, Meredith Jones, Bornface M Mutembei, Feng Yan, Qinggong Tang

Abstract read
In one paragraph

Article in Diagnostics (Basel, Switzerland), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Warid IslamSchool of Electrical and Computer Engineering, University of Oklahoma, Norman, OK 73019, USA.ORCID 0000-0002-7810-6660
Neman AbdoliSchool of Electrical and Computer Engineering, University of Oklahoma, Norman, OK 73019, USA.ORCID 0009-0002-4959-2652
Tasfiq E AlamSchool of Industrial and Systems Engineering, University of Oklahoma, Norman, OK 73019, USA.
Meredith JonesStephenson School of Biomedical Engineering, University of Oklahoma, Norman, OK 73019, USA.
Bornface M MutembeiStephenson School of Biomedical Engineering, University of Oklahoma, Norman, OK 73019, USA.ORCID 0000-0002-6775-9228
Feng YanStephenson School of Biomedical Engineering, University of Oklahoma, Norman, OK 73019, USA.
Qinggong TangStephenson School of Biomedical Engineering, University of Oklahoma, Norman, OK 73019, USA.ORCID 0000-0001-9499-5384

Funding

Tracking and Evaluation CoreU54GM104938 · NIGMS · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI TIMOTHY M VANWAGONER · 2013 to 2026
$68.2M
Tissue Pathology Shared ResourceP30CA225520 · NCI · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI Wade Williams · 2018 to 2026
$27.1M
Use of 3D Quantitative Optical Methods to Optimize Mebendazole Treatment of Ovarian CancerP20GM135009 · NIGMS · UNIVERSITY OF OKLAHOMA · PI Yuye Ling · 2022 to 2026
$13.6M
Midwest Biomedical Accelerator Consortium: MBArCU01HL152410 · NHLBI · UNIVERSITY OF MISSOURI-COLUMBIA · PI FAY, WILLIAM P, GRANT, SHEILA ANN · 2019 to 2023
$5.6M
Automatic Wide-Field Optical Coherence Tomography for Assessment of Transplant Kidney ViabilityR01DK133717 · NIDDK · UNIVERSITY OF MASSACHUSETTS AMHERST · PI POTTER, STEVEN, TANG, QINGGONG · 2022 to 2025
$2.5M
NCI NIH HHS P30 CA225520NHLBI NIH HHS U01 HL152410NIDDK NIH HHS R01 DK133717NIGMS NIH HHS P20 GM135009NIGMS NIH HHS U54 GM104938
6 · The paper itself

Abstract

backgroundAt the time of cancer diagnosis, it is crucial to accurately classify malignant gastric tumors and the possibility that patients will survive.

objectiveThis study aims to investigate the feasibility of identifying and applying a new feature extraction technique to predict the survival of gastric cancer patients.

methodsA retrospective dataset including the computed tomography (CT) images of 135 patients was assembled. Among them, 68 patients survived longer than three years. Several sets of radiomics features were extracted and were incorporated into a machine learning model, and their classification performance was characterized. To improve the classification performance, we further extracted another 27 texture and roughness parameters with 2484 superficial and spatial features to propose a new feature pool. This new feature set was added into the machine learning model and its performance was analyzed. To determine the best model for our experiment, Random Forest (RF) classifier, Support Vector Machine (SVM), K-Nearest Neighbors (KNN), and Naïve Bayes (NB) (four of the most popular machine learning models) were utilized. The models were trained and tested using the five-fold cross-validation method.

resultsUsing the area under ROC curve (AUC) as an evaluation index, the model that was generated using the new feature pool yields AUC = 0.98 ± 0.01, which was significantly higher than the models created using the traditional radiomics feature set (

conclusionsThis study demonstrated that although radiomics features produced good classification performance, creating new feature sets significantly improved the model performance.

Indexed as

area under ROC curve (AUC)feature extractiongastric cancerK-Nearest Neighbors (KNN)Naïve Bayes (NB)radiomics featuresrandom forest (RF) classifiersupport vector machine (SVM)

Identifiers

PMID38732368
PMCPMC11083029

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.