Evidence map›Paper›PMID 38730231›Full record

ArticleNature communications2024

Sex affects transcriptional associations with schizophrenia across the dorsolateral prefrontal cortex, hippocampus, and caudate nucleus.

Kynon J M Benjamin, Ria Arora, Arthur S Feltrin, Geo Pertea, Hunter H Giles, Joshua M Stolz, Laura D'Ignazio, Leonardo Collado-Torres, Joo Heon Shin, William S Ulrich and 5 more

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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  11. Multi-level therapeutic actions of cannabidiol in ketamine-induced schizophrenia psychopathology in male rats.Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology · 2024
    Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Kynon J M Benjamin *Lieber Institute for Brain Development, Baltimore, MD, USA. KynonJade.Benjamin@libd.org.
Ria Arora *Lieber Institute for Brain Development, Baltimore, MD, USA.
Arthur S FeltrinLieber Institute for Brain Development, Baltimore, MD, USA.ORCID http://orcid.org/0000-0002-1810-2203
Geo PerteaLieber Institute for Brain Development, Baltimore, MD, USA.ORCID http://orcid.org/0000-0002-3210-7182
Hunter H GilesLieber Institute for Brain Development, Baltimore, MD, USA.ORCID http://orcid.org/0000-0002-2340-5444
Joshua M StolzLieber Institute for Brain Development, Baltimore, MD, USA.
Laura D'IgnazioLieber Institute for Brain Development, Baltimore, MD, USA.
Leonardo Collado-TorresLieber Institute for Brain Development, Baltimore, MD, USA.
Joo Heon ShinLieber Institute for Brain Development, Baltimore, MD, USA.ORCID http://orcid.org/0000-0002-5563-8605
William S UlrichLieber Institute for Brain Development, Baltimore, MD, USA.
Thomas M HydeLieber Institute for Brain Development, Baltimore, MD, USA.
Joel E KleinmanLieber Institute for Brain Development, Baltimore, MD, USA.ORCID http://orcid.org/0000-0002-4210-6052
Daniel R WeinbergerLieber Institute for Brain Development, Baltimore, MD, USA.ORCID http://orcid.org/0000-0003-2409-2969
Apuã C M PaquolaLieber Institute for Brain Development, Baltimore, MD, USA. Apua.Paquola@libd.org.
Jennifer A ErwinLieber Institute for Brain Development, Baltimore, MD, USA. Jennifer.Erwin@libd.org.ORCID http://orcid.org/0000-0002-6784-9290

Funding

INTERDISCIPLINARY TRAINING PROGRAM IN NEUROSCIENCEST32MH015330 · NIMH · JOHNS HOPKINS UNIVERSITY · PI MARGOLIS, RUSSELL L · 1985 to 2024
$6.2M
Integrative cellular deconvolution of human brain RNA sequencing dataR01MH123183 · NIMH · LIEBER INSTITUTE, INC. · PI HICKS, STEPHANIE CARINNE, MAYNARD, KRISTEN ROSE · 2020 to 2023
$2.3M
Comprehensive computational analysis of genetic and regulatory differences between individuals with African and European ancestries across four brain regionsR00MD016964 · NIMHD · NORTHWESTERN UNIVERSITY AT CHICAGO · PI Kynon Jade M Benjamin · 2024 to 2026
$739k
Comprehensive computational analysis of genetic and regulatory differences between individuals with African and European ancestries across four brain regionsK99MD016964 · NIMHD · LIEBER INSTITUTE, INC. · PI BENJAMIN, KYNON JADE M · 2022 to 2023
$197k
NIMHD NIH HHS K99 MD016964NIMHD NIH HHS R00 MD016964NIMH NIH HHS R01 MH123183NIMH NIH HHS T32 MH015330
6 · The paper itself

Abstract

Schizophrenia is a complex neuropsychiatric disorder with sexually dimorphic features, including differential symptomatology, drug responsiveness, and male incidence rate. Prior large-scale transcriptome analyses for sex differences in schizophrenia have focused on the prefrontal cortex. Analyzing BrainSeq Consortium data (caudate nucleus: n = 399, dorsolateral prefrontal cortex: n = 377, and hippocampus: n = 394), we identified 831 unique genes that exhibit sex differences across brain regions, enriched for immune-related pathways. We observed X-chromosome dosage reduction in the hippocampus of male individuals with schizophrenia. Our sex interaction model revealed 148 junctions dysregulated in a sex-specific manner in schizophrenia. Sex-specific schizophrenia analysis identified dozens of differentially expressed genes, notably enriched in immune-related pathways. Finally, our sex-interacting expression quantitative trait loci analysis revealed 704 unique genes, nine associated with schizophrenia risk. These findings emphasize the importance of sex-informed analysis of sexually dimorphic traits, inform personalized therapeutic strategies in schizophrenia, and highlight the need for increased female samples for schizophrenia analyses.

Indexed as

Caudate NucleusDorsolateral Prefrontal CortexHippocampusQuantitative Trait LociSchizophreniaSex CharacteristicsAdultChromosomes, Human, XFemaleGene Expression ProfilingHumansMalePrefrontal CortexSex FactorsTranscriptome

Identifiers

PMID38730231
PMCPMC11087501

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.