Evidence map›Paper›PMID 38728580›Full record

ArticleJournal of agricultural and food chemistry2024

Discovery of Potent Glycosidases Enables Quantification of Smoke-Derived Phenolic Glycosides through Enzymatic Hydrolysis.

Youtian Cui, Mary Riley, Marcus V Moreno, Mateo M Cepeda, Ignacio Arias Perez, Yan Wen, Lik Xian Lim, Eric Andre, An Nguyen, Cody Liu and 7 more

Abstract readEvaluation Study
In one paragraph

Article in Journal of agricultural and food chemistry, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Youtian CuiGenome Center, University of California, Davis, California 95616, United States.ORCID 0000-0002-7138-2566
Mary RileyGenome Center, University of California, Davis, California 95616, United States.
Marcus V MorenoGenome Center, University of California, Davis, California 95616, United States.
Mateo M CepedaDepartment of Chemistry, University of California, Davis, California 95616, United States.ORCID 0000-0003-2613-1757
Ignacio Arias PerezDepartment of Viticulture & Enology, University of California, Davis, California 95616, United States.
Yan WenDepartment of Viticulture & Enology, University of California, Davis, California 95616, United States.
Lik Xian LimDepartment of Food Science & Technology, University of California, Davis, California 95616, United States.
Eric AndreGenome Center, University of California, Davis, California 95616, United States.
An NguyenGenome Center, University of California, Davis, California 95616, United States.
Cody LiuGenome Center, University of California, Davis, California 95616, United States.
Larry LernoDepartment of Viticulture & Enology, University of California, Davis, California 95616, United States.ORCID 0000-0001-5292-3358
Patrick K NicholsVinZymes, LLC, Davis, California 95616, United States.
Harold SchmitzMarch Capital US, LLC, Davis, California 95616, United States.
Ilias TagkopoulosGenome Center, University of California, Davis, California 95616, United States.ORCID 0000-0003-1104-7616
James A KennedyVinZymes, LLC, Davis, California 95616, United States.
Anita OberholsterDepartment of Viticulture & Enology, University of California, Davis, California 95616, United States.ORCID 0000-0002-3383-8235
Justin B SiegelGenome Center, University of California, Davis, California 95616, United States.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

When grapes are exposed to wildfire smoke, certain smoke-related volatile phenols (VPs) can be absorbed into the fruit, where they can be then converted into volatile-phenol (VP) glycosides through glycosylation. These volatile-phenol glycosides can be particularly problematic from a winemaking standpoint as they can be hydrolyzed, releasing volatile phenols, which can contribute to smoke-related off-flavors. Current methods for quantitating these volatile-phenol glycosides present several challenges, including the requirement of expensive capital equipment, limited accuracy due to the molecular complexity of the glycosides, and the utilization of harsh reagents. To address these challenges, we proposed an enzymatic hydrolysis method enabled by a tailored enzyme cocktail of novel glycosidases discovered through genome mining, and the generated VPs from VP glycosides can be quantitated by gas chromatography-mass spectrometry (GC-MS). The enzyme cocktails displayed high activities and a broad substrate scope when using commercially available VP glycosides as the substrates for testing. When evaluated in an industrially relevant matrix of Cabernet Sauvignon wine and grapes, this enzymatic cocktail consistently achieved a comparable efficacy of acid hydrolysis. The proposed method offers a simple, safe, and affordable option for smoke taint analysis.

Indexed as

FruitGas Chromatography-Mass SpectrometryGlycoside HydrolasesGlycosidesPhenolsSmokeVitisBiocatalysisHydrolysisWildfiresWineGlycoside HydrolasesGlycosidesPhenolsSmokeglycosidasehydrolysissmoke taintvolatile-phenol glycosidesvolatile phenols

Identifiers

PMID38728580
PMCPMC11117406

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.