Evidence map›Paper›PMID 38725499›Full record

ArticleChemical science2024

The circularly permuted globin domain of androglobin exhibits atypical heme stabilization and nitric oxide interaction.

Brandon J Reeder, Giuseppe Deganutti, John Ukeri, Silvia Atanasio, Dimitri A Svistunenko, Christopher Ronchetti, Juan Carlos Mobarec, Elizabeth Welbourn, Jeffrey Asaju, Marten H Vos and 2 more

Abstract read
In one paragraph

Article in Chemical science, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Hemoglobin as an oxygen gasoreceptor.Acta biochimica Polonica · 2025
    Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Brandon J ReederSchool of Life Sciences, University of Essex Wivenhoe Park Colchester Essex CO4 3SQ UK reedb@essex.ac.uk.ORCID https://orcid.org/0000-0001-7474-2611
Giuseppe DeganuttiSchool of Life Sciences, University of Essex Wivenhoe Park Colchester Essex CO4 3SQ UK reedb@essex.ac.uk.ORCID https://orcid.org/0000-0001-8780-2986
John UkeriSchool of Life Sciences, University of Essex Wivenhoe Park Colchester Essex CO4 3SQ UK reedb@essex.ac.uk.
Silvia AtanasioSchool of Life Sciences, University of Essex Wivenhoe Park Colchester Essex CO4 3SQ UK reedb@essex.ac.uk.
Dimitri A SvistunenkoSchool of Life Sciences, University of Essex Wivenhoe Park Colchester Essex CO4 3SQ UK reedb@essex.ac.uk.ORCID https://orcid.org/0000-0001-8060-2738
Christopher RonchettiSchool of Life Sciences, University of Essex Wivenhoe Park Colchester Essex CO4 3SQ UK reedb@essex.ac.uk.
Juan Carlos MobarecSchool of Life Sciences, University of Essex Wivenhoe Park Colchester Essex CO4 3SQ UK reedb@essex.ac.uk.ORCID https://orcid.org/0000-0001-9482-4294
Elizabeth WelbournSchool of Life Sciences, University of Essex Wivenhoe Park Colchester Essex CO4 3SQ UK reedb@essex.ac.uk.ORCID https://orcid.org/0009-0005-5762-6156
Jeffrey AsajuSchool of Life Sciences, University of Essex Wivenhoe Park Colchester Essex CO4 3SQ UK reedb@essex.ac.uk.
Marten H VosLOB, CNRS, INSERM, École Polytechnique, Institut Polytechnique de Paris 91128 Palaiseau France.ORCID https://orcid.org/0000-0003-0493-4831
Michael T WilsonSchool of Life Sciences, University of Essex Wivenhoe Park Colchester Essex CO4 3SQ UK reedb@essex.ac.uk.
Christopher A ReynoldsSchool of Life Sciences, University of Essex Wivenhoe Park Colchester Essex CO4 3SQ UK reedb@essex.ac.uk.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In the decade since the discovery of androglobin, a multi-domain hemoglobin of metazoans associated with ciliogenesis and spermatogenesis, there has been little advance in the knowledge of the biochemical and structural properties of this unusual member of the hemoglobin superfamily. Using a method for aligning remote homologues, coupled with molecular modelling and molecular dynamics, we have identified a novel structural alignment to other hemoglobins. This has led to the first stable recombinant expression and characterization of the circularly permuted globin domain. Exceptional for eukaryotic globins is that a tyrosine takes the place of the highly conserved phenylalanine in the CD1 position, a critical point in stabilizing the heme. A disulfide bond, similar to that found in neuroglobin, forms a closed loop around the heme pocket, taking the place of androglobin's missing CD loop and further supporting the heme pocket structure. Highly unusual in the globin superfamily is that the heme iron binds nitric oxide as a five-coordinate complex similar to other heme proteins that have nitric oxide storage functions. With rapid autoxidation and high nitrite reductase activity, the globin appears to be more tailored toward nitric oxide homeostasis or buffering. The use of our multi-template profile alignment method to yield the first biochemical characterisation of the circularly permuted globin domain of androglobin expands our knowledge of the fundamental functioning of this elusive protein and provides a pathway to better define the link between the biochemical traits of androglobin with proposed physiological functions.

Identifiers

PMID38725499
PMCPMC11077535

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.