Evidence map›Paper›PMID 38725131›Full record

ArticleMagnetic resonance in medicine2024

Efficient pulse sequence design framework for high-dimensional MR fingerprinting scans using systematic error index.

Siyuan Hu, Zhilang Qiu, Richard James Adams, Walter Zhao, Rasim Boyacioglu, Daniela Calvetti, Debra McGivney, Dan Ma

Abstract read
In one paragraph

Article in Magnetic resonance in medicine, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Siyuan HuDepartment of Biomedical Engineering, Case Western Reserve University, Cleveland, Ohio, USA.ORCID 0000-0003-3137-0605
Zhilang QiuDepartment of Biomedical Engineering, Case Western Reserve University, Cleveland, Ohio, USA.ORCID 0000-0002-8327-2233
Richard James AdamsDepartment of Biomedical Engineering, Case Western Reserve University, Cleveland, Ohio, USA.
Walter ZhaoDepartment of Biomedical Engineering, Case Western Reserve University, Cleveland, Ohio, USA.ORCID 0000-0001-8907-4935
Rasim BoyaciogluDepartment of Radiology, Case Western Reserve University, Cleveland, Ohio, USA.ORCID 0000-0002-3099-2640
Daniela CalvettiDepartment of Mathematics, Applied Mathematics, and Statistics, Case Western Reserve University, Cleveland, Ohio, USA.
Debra McGivneyDepartment of Biomedical Engineering, Case Western Reserve University, Cleveland, Ohio, USA.ORCID 0000-0003-2059-6107
Dan MaDepartment of Biomedical Engineering, Case Western Reserve University, Cleveland, Ohio, USA.ORCID 0000-0003-1664-9579

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM007250 · NIGMS · CASE WESTERN RESERVE UNIVERSITY · PI HUANG, ALEX YEE-CHEN · 1985 to 2023
$33.4M
MR Fingerprinting for EpilepsyR01NS109439 · NINDS · CLEVELAND CLINIC LERNER COM-CWRU · PI Dan Ma, Zhong Irene Wang · 2019 to 2026
$4.2M
Development of Magnetic Resonance Fingerprinting (MRF) to Assess Response to Neoadjuvant Chemotherapy in Breast CancerR01CA282516 · NCI · CASE WESTERN RESERVE UNIVERSITY · PI Yong Chen, Dan Ma · 2023 to 2026
$2.4M
MR Fingerprinting based Quantitative Imaging and Analysis Platform (MRF-QIA) for brain tumors.R01CA269604 · NCI · CASE WESTERN RESERVE UNIVERSITY · PI BADVE, CHAITRA, DAVATZIKOS, CHRISTOS · 2023 to 2025
$1.7M
Comprehensive MR Fingerprinting for Infants and Young Children at Risk for Developmental Delays.R01HD112923 · NICHD · DUKE UNIVERSITY · PI Dan Ma, DEANNE E WILSON-COSTELLO · 2024 to 2026
$1.7M
Optimization of Magnetic Resonance Fingerprintingusing Quantum Inspired AlgorithmsR21EB029658 · NIBIB · CASE WESTERN RESERVE UNIVERSITY · PI MCGIVNEY, DEBRA · 2021 to 2023
$644k
NCI NIH HHS R01 CA269604NCI NIH HHS R01 CA282516NIBIB NIH HHS R21 EB029658NICHD NIH HHS R01 HD112923NIGMS NIH HHS T32 GM007250NINDS NIH HHS R01 NS109439
6 · The paper itself

Abstract

purposeFor effective optimization of MR fingerprinting (MRF) pulse sequences, estimating and minimizing errors from actual scan conditions are crucial. Although virtual-scan simulations offer an approximation to these errors, their computational demands become expensive for high-dimensional MRF frameworks, where interactions between more than two tissue properties are considered. This complexity makes sequence optimization impractical. We introduce a new mathematical model, the systematic error index (SEI), to address the scalability challenges for high-dimensional MRF sequence design.

methodsBy eliminating the need to perform dictionary matching, the SEI model approximates quantification errors with low computational costs. The SEI model was validated in comparison with virtual-scan simulations. The SEI model was further applied to optimize three high-dimensional MRF sequences that quantify two to four tissue properties. The optimized scans were examined in simulations and healthy subjects.

resultsThe proposed SEI model closely approximated the virtual-scan simulation outcomes while achieving hundred- to thousand-times acceleration in the computational speed. In both simulation and in vivo experiments, the optimized MRF sequences yield higher measurement accuracy with fewer undersampling artifacts at shorter scan times than the heuristically designed sequences.

conclusionWe developed an efficient method for estimating real-world errors in MRF scans with high computational efficiency. Our results illustrate that the SEI model could approximate errors both qualitatively and quantitatively. We also proved the practicality of the SEI model of optimizing sequences for high-dimensional MRF frameworks with manageable computational power. The optimized high-dimensional MRF scans exhibited enhanced robustness against undersampling and system imperfections with faster scan times.

Indexed as

AlgorithmsBrainComputer SimulationMagnetic Resonance ImagingHumansImage EnhancementImage Interpretation, Computer-AssistedImage Processing, Computer-AssistedReproducibility of ResultsSignal Processing, Computer-Assistedaccelerated simulationerror characterizationmagnetic resonance fingerprintingpulse sequence optimizationundersampling artifacts

Identifiers

PMID38725131
PMCPMC11262985

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.