Evidence map›Paper›PMID 38725058›Full record

ArticlePlant methods2024

A protoplast-based transient gene expression assay for the identification of heat and oxidative stress-regulatory genes in perennial ryegrass.

Shanshan Lei, Yaolong Zhu, Weiyu Jia, Jing Zhang, Yingjun Chi, Bin Xu

Abstract read
In one paragraph

Article in Plant methods, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Shanshan LeiCollege of Agro-Grassland Science, Nanjing Agricultural University, Nanjing, 210095, People's Republic of China.
Yaolong ZhuCollege of Agro-Grassland Science, Nanjing Agricultural University, Nanjing, 210095, People's Republic of China.
Weiyu JiaCollege of Agro-Grassland Science, Nanjing Agricultural University, Nanjing, 210095, People's Republic of China.
Jing ZhangCollege of Agro-Grassland Science, Nanjing Agricultural University, Nanjing, 210095, People's Republic of China.
Yingjun ChiCollege of Agro-Grassland Science, Nanjing Agricultural University, Nanjing, 210095, People's Republic of China.
Bin XuCollege of Agro-Grassland Science, Nanjing Agricultural University, Nanjing, 210095, People's Republic of China. binxu@njau.edu.cn.

Funding

National Key Research and Development Program of China 2023YFF1001403National Natural Science Foundation of China 32271755
6 · The paper itself

Abstract

backgroundWith the accumulating omics data, an efficient and time-saving transient assay to express target genes is desired. Mesophyll protoplasts, maintaining most stress-physiological responses and cellular activities as intact plants, offer an alternative transient assay to study target genes' effects on heat and oxidative stress responses.

resultsIn this study, a perennial ryegrass (Lolium perenne L.) mesophyll protoplast-based assay was established to effectively over- or down-regulate target genes. The relative expression levels of the target genes could be quantified using RT-qPCR, and the effects of heat and H

conclusionThis protoplast-based rapid stress regulatory gene identification assay was briefed as 'PRIDA' that will complement the stable genetic transformation studies to rapidly identify candidate stress-regulatory genes in perennial ryegrass and other grass species.

Indexed as

Heat stressOxidative stressProtoplastRyegrassTransient gene expression

Identifiers

PMID38725058
PMCPMC11080139

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.