Evidence map›Paper›PMID 38724890›Full record

ArticleBMC infectious diseases2024

Simple mathematical model for predicting COVID-19 outbreaks in Japan based on epidemic waves with a cyclical trend.

Hiroki Manabe, Toshie Manabe, Yuki Honda, Yoshihiro Kawade, Dan Kambayashi, Yoshiki Manabe, Koichiro Kudo

Abstract read
In one paragraph

Article in BMC infectious diseases, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

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0cells of the map it votes in
3citing papers in PubMed
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1 · What the graph read from it

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

7 authors.

Hiroki ManabeShitennoji University, 3-2-1 Gakuenmae, Habikino City, 583-8501, Osaka, Japan. manabe@shitennoji.ac.jp.
Toshie ManabeNagoya City University School of Data Science, Nagoya City, Aichi, Japan.
Yuki HondaShitennoji University, 3-2-1 Gakuenmae, Habikino City, 583-8501, Osaka, Japan.
Yoshihiro KawadeNagoya City University Graduate School of Medicine, Nagoya City, Aichi, Japan.
Dan KambayashiNagoya City University Graduate School of Medicine, Nagoya City, Aichi, Japan.
Yoshiki ManabeTokyo University Graduate School of Engineering, Tokyo, Japan.
Koichiro KudoWaseda University Organization Regional and inter-regional Studies, Tokyo, Japan.

Funding

Grants-in-Aid for Scientific Research (KAKENHI, Promotion of Joint International Research B) #20KK0218Japan Science and Technology (JST) Mirai Program #20345310
6 · The paper itself

Abstract

backgroundSeveral models have been used to predict outbreaks during the COVID-19 pandemic, with limited success. We developed a simple mathematical model to accurately predict future epidemic waves.

methodsWe used data from the Ministry of Health, Labour and Welfare of Japan for newly confirmed COVID-19 cases. COVID-19 case data were summarized as weekly data, and epidemic waves were visualized and identified. The periodicity of COVID-19 in each prefecture of Japan was confirmed using time-series analysis and the autocorrelation coefficient, which was used to investigate the longer-term pattern of COVID-19 cases. Outcomes using the autocorrelation coefficient were visualized via a correlogram to capture the periodicity of the data. An algorithm for a simple prediction model of the seventh COVID-19 wave in Japan comprised three steps. Step 1: machine learning techniques were used to depict the regression lines for each epidemic wave, denoting the "rising trend line"; Step 2: an exponential function with good fit was identified from data of rising straight lines up to the sixth wave, and the timing of the rise of the seventh wave and speed of its spread were calculated; Step 3: a logistic function was created using the values calculated in Step 2 as coefficients to predict the seventh wave. The accuracy of the model in predicting the seventh wave was confirmed using data up to the sixth wave.

resultsUp to March 31, 2023, the correlation coefficient value was approximately 0.5, indicating significant periodicity. The spread of COVID-19 in Japan was repeated in a cycle of approximately 140 days. Although there was a slight lag in the starting and peak times in our predicted seventh wave compared with the actual epidemic, our developed prediction model had a fairly high degree of accuracy.

conclusionOur newly developed prediction model based on the rising trend line could predict COVID-19 outbreaks up to a few months in advance with high accuracy. The findings of the present study warrant further investigation regarding application to emerging infectious diseases other than COVID-19 in which the epidemic wave has high periodicity.

Indexed as

COVID-19Models, TheoreticalSARS-CoV-2AlgorithmsDisease OutbreaksForecastingHumansJapanMachine LearningPandemicsAutocorrelation coefficientCorrelogramCOVID-19Epidemic waveMachine learning techniqueMathematical modelPeriodicityPrediction modelRising trend lineSARS-CoV-2

Identifiers

PMID38724890
PMCPMC11080248

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.