Evidence map›Paper›PMID 38724665›Full record

ArticleCurrent microbiology2024

SVEN_5003 is a Major Developmental Regulator in Streptomyces venezuelae.

Yanping Zhu, Ting Lu, Hanlei Zhang, Meng Liu, Xiuhua Pang

Abstract read
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In one paragraph

Article in Current microbiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Rescue of morphological defects inMicrobiology spectrum · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Yanping ZhuThe State Key Laboratory of Microbial Technology, Shandong University, Qingdao, 266237, China.
Ting LuThe State Key Laboratory of Microbial Technology, Shandong University, Qingdao, 266237, China.
Hanlei ZhangThe State Key Laboratory of Microbial Technology, Shandong University, Qingdao, 266237, China.
Meng LiuSchool of Municipal and Environmental Engineering, Shandong Jianzhu University, Jinan, 250101, China.
Xiuhua PangThe State Key Laboratory of Microbial Technology, Shandong University, Qingdao, 266237, China. pangxiuhua@sdu.edu.cn.

Funding

the National Natural Science Foundation of China 32270072
6 · The paper itself

Abstract

Many regulatory genes that affect cellular development in Streptomyces, such as the canonical bld genes, have already been identified. However, in this study, we identified sven_5003 in Streptomyces venezuelae as a major new developmental regulatory gene, the deletion of which leads to a bald phenotype, typical of bld mutants, under multiple growth conditions. Our data indicated that disruption of sven_5003 also has a differential impact on the production of the two antibiotics jadomycin and chloramphenicol. Enhanced production of jadomycin but reduced production of chloramphenicol were detected in our sven_5003 mutant strain (S. venezuelae D5003). RNA-Seq analysis indicated that SVEN_5003 impacts expression of hundreds of genes, including genes involved in development, primary and secondary metabolism, and genes of unknown function, a finding confirmed by real-time PCR analysis. Transcriptional analysis indicated that sven_5003 is an auto-regulatory gene, repressing its own expression. Despite the evidence indicating that SVEN_5003 is a regulatory factor, a putative DNA-binding domain was not predicted from its primary amino acid sequence, implying an unknown regulatory mechanism by SVEN_5003. Our findings revealed that SVEN_5003 is a pleiotropic regulator with a critical role in morphological development in S. venezuelae.

Indexed as

Anti-Bacterial AgentsBacterial ProteinsGene Expression Regulation, BacterialStreptomycesChloramphenicolIsoquinolinesAnti-Bacterial AgentsBacterial ProteinsChloramphenicolIsoquinolines

Identifiers

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.