Evidence map›Paper›PMID 38719469›Full record

ArticleGenome research2024

Estrogen receptor 1 chromatin profiling in human breast tumors reveals high inter-patient heterogeneity with enrichment of risk SNPs and enhancer activity at most-conserved regions.

Stacey E P Joosten, Sebastian Gregoricchio, Suzan Stelloo, Elif Yapıcı, Chia-Chi Flora Huang, Kerim Yavuz, Maria Donaldson Collier, Tunç Morova, Umut Berkay Altintaş, Yongsoo Kim and 8 more

Abstract read
In one paragraph

Article in Genome research, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Trial
  3. Article
  4. Article
  5. Review
  6. Article
  7. Review
  8. Article
  9. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

18 authors.

Stacey E P Joosten *Division of Oncogenomics, The Netherlands Cancer Institute, 1066 CX Amsterdam, The Netherlands.ORCID 0000-0001-9734-6347
Sebastian Gregoricchio *Division of Oncogenomics, The Netherlands Cancer Institute, 1066 CX Amsterdam, The Netherlands.ORCID 0000-0001-9209-5403
Suzan StellooOncode Institute, The Netherlands.ORCID 0000-0002-6696-836X
Elif YapıcıKoç University School of Medicine, 34450 Istanbul, Turkey.
Chia-Chi Flora HuangVancouver Prostate Centre, University of British Columbia, Vancouver, British Columbia, V6H 3Z6 Canada.ORCID 0000-0002-2150-3139
Kerim YavuzVancouver Prostate Centre, University of British Columbia, Vancouver, British Columbia, V6H 3Z6 Canada.ORCID 0000-0003-4980-8804
Maria Donaldson CollierDivision of Oncogenomics, The Netherlands Cancer Institute, 1066 CX Amsterdam, The Netherlands.ORCID 0000-0001-6403-6713
Tunç MorovaVancouver Prostate Centre, University of British Columbia, Vancouver, British Columbia, V6H 3Z6 Canada.
Umut Berkay AltintaşVancouver Prostate Centre, University of British Columbia, Vancouver, British Columbia, V6H 3Z6 Canada.ORCID 0000-0002-0861-5013
Yongsoo KimDepartment of Pathology, Amsterdam University Medical Center, Cancer Center Amsterdam, 1081 HV Amsterdam, The Netherlands.ORCID 0000-0002-2995-2131
Sander CanisiusDivision of Molecular Pathology, The Netherlands Cancer Institute, 1066 CX Amsterdam, The Netherlands.ORCID 0000-0003-3888-8829
Cathy B MoelansDepartment of Pathology, Utrecht University Medical Centre, 3584 CX Utrecht, The Netherlands.ORCID 0000-0001-9992-8703
Paul J van DiestDepartment of Pathology, Utrecht University Medical Centre, 3584 CX Utrecht, The Netherlands.
Gozde KorkmazKoç University School of Medicine, 34450 Istanbul, Turkey.ORCID 0000-0002-3574-1015
Nathan A LackKoç University School of Medicine, 34450 Istanbul, Turkey.ORCID 0000-0001-7399-5844
Michiel VermeulenOncode Institute, The Netherlands.ORCID 0000-0003-0836-6894
Sabine C LinnDivision of Molecular Pathology, The Netherlands Cancer Institute, 1066 CX Amsterdam, The Netherlands.ORCID 0000-0001-5541-0347
Wilbert ZwartDivision of Oncogenomics, The Netherlands Cancer Institute, 1066 CX Amsterdam, The Netherlands; w.zwart@nki.nl.ORCID 0000-0002-9823-7289

Funding

Epidemiologic StudiesU19CA148065 · NCI · HARVARD SCHOOL OF PUBLIC HEALTH · PI AHSAN, HABIBUL, BRUGGE, JOAN SIEFERT · 2010 to 2014
$10.6M
Cancer Research UK C1287/A10118NCI NIH HHS U19 CA148065
6 · The paper itself

Abstract

Estrogen Receptor 1 (ESR1; also known as ERα, encoded by

Indexed as

Breast NeoplasmsChromatinEnhancer Elements, GeneticEstrogen Receptor alphaCell Line, TumorFemaleGene Expression Regulation, NeoplasticGenetic HeterogeneityHumansPolymorphism, Single NucleotideChromatinEstrogen Receptor alpha

Identifiers

PMID38719469
PMCPMC11146591

What OpenQuestion holds

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LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.