Evidence map›Paper›PMID 38718125›Full record

ArticleScience advances2024

Phenotypic targeting using magnetic nanoparticles for rapid characterization of cellular proliferation regulators.

Zongjie Wang, Hansen Wang, Sichun Lin, Stephane Angers, Edward H Sargent, Shana O Kelley

Abstract read
In one paragraph

Article in Science advances, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Zongjie WangDepartment of Biomedical Engineering, McCormick School of Engineering, Northwestern University, Evanston, IL 60208, USA.ORCID 0000-0001-9900-7197
Hansen WangDepartment of Pharmaceutical Sciences, Leslie Dan Faculty of Pharmacy, University of Toronto, Toronto M5S 3M2, Canada.ORCID 0000-0003-4414-3372
Sichun LinDepartment of Pharmaceutical Sciences, Leslie Dan Faculty of Pharmacy, University of Toronto, Toronto M5S 3M2, Canada.ORCID 0000-0002-7070-5765
Stephane AngersDepartment of Pharmaceutical Sciences, Leslie Dan Faculty of Pharmacy, University of Toronto, Toronto M5S 3M2, Canada.ORCID 0000-0001-7241-9044
Edward H SargentThe Edward S. Rogers Sr. Department of Electrical & Computer Engineering, University of Toronto, Toronto M5S 3G4, Canada.ORCID 0000-0003-0396-6495
Shana O KelleyDepartment of Biomedical Engineering, McCormick School of Engineering, Northwestern University, Evanston, IL 60208, USA.ORCID 0000-0003-3360-5359

Funding

Development of Next-Generation Blood-to-barcode (B2B) chip for In Vivo CRISPR-Based Discovery of Metastasis RegulatorsR01CA277507 · NCI · NORTHWESTERN UNIVERSITY · PI Shana O Kelley · 2023 to 2026
$2.5M
Development of microfluidic enabled CRISPR-Cas9 functional genetic screening technologies for target discovery in cancer immunotherapyR01CA260170 · NCI · UNIVERSITY OF TORONTO · PI ANGERS, STEPHANE, KELLEY, SHANA O · 2021 to 2025
$1.2M
NCI NIH HHS R01 CA260170NCI NIH HHS R01 CA277507
6 · The paper itself

Abstract

Genome-wide CRISPR screens have provided a systematic way to identify essential genetic regulators of a phenotype of interest with single-cell resolution. However, most screens use live/dead readout of viability to identify factors of interest. Here, we describe an approach that converts cell proliferation into the degree of magnetization, enabling downstream microfluidic magnetic sorting to be performed. We performed a head-to-head comparison and verified that the magnetic workflow can identify the same hits from a traditional screen while reducing the screening period from 4 weeks to 1 week. Taking advantage of parallelization and performance, we screened multiple mesenchymal cancer cell lines for their dependency on cell proliferation. We found and validated pan- and cell-specific potential therapeutic targets. The method presented provides a nanoparticle-enabled approach means to increase the breadth of data collected in CRISPR screens, enabling the rapid discovery of drug targets for treatment.

Indexed as

Cell ProliferationMagnetite NanoparticlesCell Line, TumorCRISPR-Cas SystemsHumansPhenotypeMagnetite Nanoparticles

Identifiers

PMID38718125
PMCPMC11078187

What OpenQuestion holds

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LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.