Evidence map›Paper›PMID 38717860›Full record

ArticleEnvironmental science & technology2024

RotoBOD─Quantifying Oxygen Consumption by Suspended Particles and Organisms.

Clarissa Karthäuser, Paul D Fucile, Amy E Maas, Leocadio Blanco-Bercial, Hannah Gossner, Daniel P Lowenstein, Yuuki J Niimi, Benjamin A S Van Mooy, Joan M Bernhard, Ken O Buesseler and 1 more

Abstract read
In one paragraph

Article in Environmental science & technology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Clarissa KarthäuserWoods Hole Oceanographic Institution, 266 Woods Hole Road, Woods Hole, Falmouth, Massachusetts 02543, United States.ORCID 0000-0001-9239-1528
Paul D FucileWoods Hole Oceanographic Institution, 266 Woods Hole Road, Woods Hole, Falmouth, Massachusetts 02543, United States.
Amy E MaasBermuda Institute of Ocean Sciences, Arizona State University, 17 Biological Station, St. George's GE01, Bermuda.
Leocadio Blanco-BercialBermuda Institute of Ocean Sciences, Arizona State University, 17 Biological Station, St. George's GE01, Bermuda.
Hannah GossnerBermuda Institute of Ocean Sciences, Arizona State University, 17 Biological Station, St. George's GE01, Bermuda.
Daniel P LowensteinWoods Hole Oceanographic Institution, 266 Woods Hole Road, Woods Hole, Falmouth, Massachusetts 02543, United States.
Yuuki J NiimiBermuda Institute of Ocean Sciences, Arizona State University, 17 Biological Station, St. George's GE01, Bermuda.
Benjamin A S Van MooyWoods Hole Oceanographic Institution, 266 Woods Hole Road, Woods Hole, Falmouth, Massachusetts 02543, United States.ORCID 0000-0002-2804-6508
Joan M BernhardWoods Hole Oceanographic Institution, 266 Woods Hole Road, Woods Hole, Falmouth, Massachusetts 02543, United States.
Ken O BuesselerWoods Hole Oceanographic Institution, 266 Woods Hole Road, Woods Hole, Falmouth, Massachusetts 02543, United States.
Stefan M SievertWoods Hole Oceanographic Institution, 266 Woods Hole Road, Woods Hole, Falmouth, Massachusetts 02543, United States.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sinking or floating is the natural state of planktonic organisms and particles in the ocean. Simulating these conditions is critical when making measurements, such as respirometry, because they allow the natural exchange of substrates and products between sinking particles and water flowing around them and prevent organisms that are accustomed to motion from changing their metabolism. We developed a rotating incubator, the RotoBOD (named after its capability to rotate and determine biological oxygen demand, BOD), that uniquely enables automated oxygen measurements in small volumes while keeping the samples in their natural state of suspension. This allows highly sensitive rate measurements of oxygen utilization and subsequent characterization of single particles or small planktonic organisms, such as copepods, jellyfish, or protists. As this approach is nondestructive, it can be combined with several further measurements during and after the incubation, such as stable isotope additions and molecular analyses. This makes the instrument useful for ecologists, biogeochemists, and potentially other user groups such as aquaculture facilities. Here, we present the technical background of our newly developed apparatus and provide examples of how it can be utilized to determine oxygen production and consumption in small organisms and particles.

Indexed as

OxygenAnimalsCopepodaOxygen ConsumptionPlanktonOxygenbiogeochemistrybiotechnologyoxygen consumptionplanktonic organismsrespirometryrotating incubatorsinking particlessuspended samples

Identifiers

PMID38717860
PMCPMC11112748

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.