Evidence map›Paper›PMID 38715816›Full record

ArticleAmerican journal of translational research2024

Prognostic value of RNF113A shows a correlation with immune infiltrates in colorectal cancer.

Minghui Chen, Xiaoyu Song, Huizhen Lin, Wenli Cheng

Abstract read
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Article in American journal of translational research, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
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1citing papers in PubMed
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1 · What the graph read from it

What it found

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3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

4 authors.

Minghui ChenDepartment of Blood Transfusion, The Sixth Affiliated Hospital, Sun Yat-sen University Guangzhou 510655, Guangdong, China.
Xiaoyu SongCentral Laboratory, Guangzhou Panyu Central Hospital Guangzhou 511400, Guangdong, China.
Huizhen LinZhongshan School of Medicine, Sun Yat-sen University Guangzhou 510080, Guangdong, China.
Wenli ChengDepartment of Blood Transfusion, The Sixth Affiliated Hospital, Sun Yat-sen University Guangzhou 510655, Guangdong, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveTo explore the prognostic role of RNF113A in colorectal cancer (CRC) and its relationship with immune infiltration.

methodsData from publicly available datasets were collected and analyzed to evaluate RNF113A expression in different tumors compared with normal samples and investigate the relationship between RNF113A and CRC survival. The protein expression of RNF113A among colorectal cancer cell lines (HCT116, Caco2, Colon3) and human colorectal mucosa cell (FHC) was detected as well. Pathway enrichment analysis was performed to identify signaling pathways associated with RNF113A. The diagnostic and prognostic values of RNF113A expression in CRC and its correlation with cancer immune characteristics were analyzed by using the TIMER and TISIDB databases.

resultsRNF113A is predominantly overexpressed in CRC, which has diagnostic and prognostic value. The protein expression of RNF113A in Colon3 cells was significantly higher than that of FHC cells (P<0.05). The rRNA processing signaling pathway-related gene SNU13 was positively correlated with RNF113A (R=0.245, P<0.001). The area under the ROC curve (AUC) of RNF113A expression for diagnosis of CRC was 0.885. The nomogram showed that RNF113A expression outperformed traditional clinical features such as age in predicting prognosis. RNF113A expression was negatively correlated with the infiltration level of memory B cells, NK cells, Th2 cells, and CD8

conclusionRNF113A may regulate CRC through the rRNA processing pathway and negatively correlate with the infiltration level of immune cells, serving as a prognostic biomarker for CRC.

Indexed as

colorectal cancerimmune infiltrateprognosisRNF113ArRNA processing pathway

Identifiers

PMID38715816
PMCPMC11070368

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