Evidence map›Paper›PMID 38715663›Full record

ArticlePractical laboratory medicine2024

A novel XNA-based Luminex assay to detect UBA1 somatic mutations associated with VEXAS syndrome.

Yunqing Ma, ShianPin Hu, Rui Ni, Wei Liu, Andrew Fu, Michael Sha, Aiguo Zhang, Chuanyi M Lu

Abstract read
In one paragraph

Article in Practical laboratory medicine, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Yunqing MaDiaCarta Inc., 4385 Hopyard Rd, Suite 100 Pleasanton, CA, 94588, USA.
ShianPin HuDiaCarta Inc., 4385 Hopyard Rd, Suite 100 Pleasanton, CA, 94588, USA.
Rui NiDiaCarta Inc., 4385 Hopyard Rd, Suite 100 Pleasanton, CA, 94588, USA.
Wei LiuDiaCarta Inc., 4385 Hopyard Rd, Suite 100 Pleasanton, CA, 94588, USA.
Andrew FuDiaCarta Inc., 4385 Hopyard Rd, Suite 100 Pleasanton, CA, 94588, USA.
Michael ShaDiaCarta Inc., 4385 Hopyard Rd, Suite 100 Pleasanton, CA, 94588, USA.
Aiguo ZhangDiaCarta Inc., 4385 Hopyard Rd, Suite 100 Pleasanton, CA, 94588, USA.
Chuanyi M LuDiaCarta Inc., 4385 Hopyard Rd, Suite 100 Pleasanton, CA, 94588, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Objectives: Patients with VEXAS syndrome carry mutations of UBA1 gene coding for the E1 enzyme. The three most frequent mutations are p.M41T(122T > C), p.M41V (c.121A > G), and p.M41L (c.121A > C) in codon 41 of exon 3. Currently, sanger sequencing was mainly used to detect these mutations, which has low sensitivity and low throughput. There is a need of high sensitivity, simple and high throughput method to characterize patients with VEXAS syndrome. Methods: Based on our proprietary XNA technology, we have developed a QClamp® Plex platform to detect eight mutations in a single reaction using the Luminex xMap technology. The assay sensitivity, specificity and precision were subsequently evaluated. Furthermore, the reference interval and clinical sensitivity/specificity were estimated using clinical healthy/positive DNA samples and the sanger sequencing method was used for comparison. Results: With spiking synthetic mutant DNA in wildtype GM24385 cell line DNA, this assay can detect Conclusions: The QClamps® Plex

Indexed as

QClamp® plexUBA1 mutationVEXAS syndromeXNA clamping

Identifiers

PMID38715663
PMCPMC11075056

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.