Evidence map›Paper›PMID 38714853›Full record

ArticleNature cell biology2024

Cerebral organoids display dynamic clonal growth and tunable tissue replenishment.

Dominik Lindenhofer, Simon Haendeler, Christopher Esk, Jamie B Littleboy, Clarisse Brunet Avalos, Julia Naas, Florian G Pflug, Eline G P van de Ven, Daniel Reumann, Alexandre D Baffet and 2 more

Abstract read
In one paragraph

Article in Nature cell biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Using Brain Organoids to Explore Human Neurobiology.Cellular and molecular neurobiology · 2026
    Review
  3. Review
  4. Article
  5. Review
  6. Review
  7. Article
  8. Article
  9. Review
  10. Review
  11. Modelling human brain development and disease with organoids.Nature reviews. Molecular cell biology · 2025
    Review
  12. Article
  13. Article
  14. Review
  15. Brain organoids: A new tool for modelling of neurodevelopmental disorders.Journal of cellular and molecular medicine · 2024
    Review
  16. It takes two to expand the cortex.Nature cell biology · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Dominik Lindenhofer *Institute of Molecular Biotechnology of the Austrian Academy of Science, Vienna BioCenter, Vienna, Austria.ORCID 0000-0001-8838-7163
Simon Haendeler *Vienna Biocenter PhD Program, University of Vienna and the Medical University of Vienna, Vienna, Austria.ORCID 0000-0003-0442-3177
Christopher Esk *Institute of Molecular Biotechnology of the Austrian Academy of Science, Vienna BioCenter, Vienna, Austria. christopher.esk@uibk.ac.at.ORCID 0000-0003-1833-0801
Jamie B Littleboy *Institute of Molecular Biotechnology of the Austrian Academy of Science, Vienna BioCenter, Vienna, Austria.ORCID 0000-0002-1847-0794
Clarisse Brunet AvalosInstitut Curie, PSL Research University, CNRS UMR144, Paris, France.ORCID 0000-0002-7781-004X
Julia NaasVienna Biocenter PhD Program, University of Vienna and the Medical University of Vienna, Vienna, Austria.ORCID 0000-0003-3766-0945
Florian G PflugCenter of Integrative Bioinformatics Vienna, Max Perutz Labs, University of Vienna and Medical University of Vienna, Vienna BioCenter, Vienna, Austria.ORCID 0000-0002-5344-5359
Eline G P van de VenInstitute of Molecular Biotechnology of the Austrian Academy of Science, Vienna BioCenter, Vienna, Austria.
Daniel ReumannInstitute of Molecular Biotechnology of the Austrian Academy of Science, Vienna BioCenter, Vienna, Austria.
Alexandre D BaffetInstitut Curie, PSL Research University, CNRS UMR144, Paris, France.ORCID 0000-0001-9194-4258
Arndt von HaeselerVienna Biocenter PhD Program, University of Vienna and the Medical University of Vienna, Vienna, Austria.ORCID 0000-0002-3366-4458
Jürgen A KnoblichInstitute of Molecular Biotechnology of the Austrian Academy of Science, Vienna BioCenter, Vienna, Austria. juergen.knoblich@imba.oeaw.ac.at.ORCID 0000-0002-6751-3404

Funding

Austrian Science Fund FWF DOC 72
6 · The paper itself

Abstract

During brain development, neural progenitors expand through symmetric divisions before giving rise to differentiating cell types via asymmetric divisions. Transition between those modes varies among individual neural stem cells, resulting in clones of different sizes. Imaging-based lineage tracing allows for lineage analysis at high cellular resolution but systematic approaches to analyse clonal behaviour of entire tissues are currently lacking. Here we implement whole-tissue lineage tracing by genomic DNA barcoding in 3D human cerebral organoids, to show that individual stem cell clones produce progeny on a vastly variable scale. By using stochastic modelling we find that variable lineage sizes arise because a subpopulation of lineages retains symmetrically dividing cells. We show that lineage sizes can adjust to tissue demands after growth perturbation via chemical ablation or genetic restriction of a subset of cells in chimeric organoids. Our data suggest that adaptive plasticity of stem cell populations ensures robustness of development in human brain organoids.

Indexed as

Cell LineageNeural Stem CellsOrganoidsAnimalsBrainCell DifferentiationCell ProliferationClone CellsDNA Barcoding, TaxonomicHumansNeurogenesis

Identifiers

PMID38714853
PMCPMC11098754

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.