Evidence map›Paper›PMID 38713528›Full record

ReviewJournal of proteome research2024

The Future of Proteomics is Up in the Air: Can Ion Mobility Replace Liquid Chromatography for High Throughput Proteomics?

Yuming Jiang, Daniel DeBord, Heidi Vitrac, Jordan Stewart, Ali Haghani, Jennifer E Van Eyk, Justyna Fert-Bober, Jesse G Meyer

Abstract readReview
In one paragraph

Review in Journal of proteome research, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. Advances in the Clinical Application of High-throughput Proteomics.Exploratory research and hypothesis in medicine
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Yuming JiangDepartment of Computational Biomedicine, Cedars-Sinai Medical Center, Los Angeles, California 90048, United States.
Daniel DeBordMOBILion Systems Inc., Chadds Ford, Pennsylvania 19317, United States.
Heidi VitracMOBILion Systems Inc., Chadds Ford, Pennsylvania 19317, United States.ORCID 0000-0002-8858-4914
Jordan StewartMOBILion Systems Inc., Chadds Ford, Pennsylvania 19317, United States.
Ali HaghaniThe Smidt Heart Institute, Cedars-Sinai Medical Center, Los Angeles, California 90048, United States.
Jennifer E Van EykThe Smidt Heart Institute, Cedars-Sinai Medical Center, Los Angeles, California 90048, United States.ORCID 0000-0001-9050-148X
Justyna Fert-BoberThe Smidt Heart Institute, Cedars-Sinai Medical Center, Los Angeles, California 90048, United States.ORCID 0000-0002-2824-5056
Jesse G MeyerDepartment of Computational Biomedicine, Cedars-Sinai Medical Center, Los Angeles, California 90048, United States.ORCID 0000-0003-2753-3926

Funding

Exosome Therapeutics to Dissect HFpEF MechanismsR01HL155346 · NHLBI · CEDARS-SINAI MEDICAL CENTER · PI MARBAN, EDUARDO, VAN EYK, JENNIFER E · 2021 to 2024
$3.3M
Design and Validation of Easy-to-Adopt Mass Spectrometry Assays of Importance to ObesityU01DK124019 · NIDDK · CEDARS-SINAI MEDICAL CENTER · PI SOBHANI, KIMIA, VAN EYK, JENNIFER E · 2019 to 2022
$3.1M
Democratizing Multi-Omics to Expedite Discovery of Hidden Metabolic PathwaysR35GM142502 · NIGMS · MEDICAL COLLEGE OF WISCONSIN · PI MEYER, JESSE · 2021 to 2025
$2.2M
NHLBI NIH HHS R01 HL155346NIDDK NIH HHS U01 DK124019NIGMS NIH HHS R35 GM142502
6 · The paper itself

Abstract

The coevolution of liquid chromatography (LC) with mass spectrometry (MS) has shaped contemporary proteomics. LC hyphenated to MS now enables quantification of more than 10,000 proteins in a single injection, a number that likely represents most proteins in specific human cells or tissues. Separations by ion mobility spectrometry (IMS) have recently emerged to complement LC and further improve the depth of proteomics. Given the theoretical advantages in speed and robustness of IMS in comparison to LC, we envision that ongoing improvements to IMS paired with MS may eventually make LC obsolete, especially when combined with targeted or simplified analyses, such as rapid clinical proteomics analysis of defined biomarker panels. In this perspective, we describe the need for faster analysis that might drive this transition, the current state of direct infusion proteomics, and discuss some technical challenges that must be overcome to fully complete the transition to entirely gas phase proteomics.

Indexed as

Ion Mobility SpectrometryProteomicsChromatography, LiquidHigh-Throughput Screening AssaysHumansMass Spectrometrydirect infusionhigh throughpution mobilityshotgun proteomics

Identifiers

PMID38713528
PMCPMC11161313

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.