Evidence map›Paper›PMID 38708794›Full record

ArticleG3 (Bethesda, Md.)2024

The pattern of genetic variability in a core collection of 2,021 cowpea accessions.

Christopher J Fiscus, Ira A Herniter, Marimagne Tchamba, Rajneesh Paliwal, María Muñoz-Amatriaín, Philip A Roberts, Michael Abberton, Oluwafemi Alaba, Timothy J Close, Olaniyi Oyatomi and 1 more

Abstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Identification of novel genomic regions associated with yield-related traits in cowpea (Molecular breeding : new strategies in plant improvement · 2025
    Article
  9. Article
  10. Review
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Christopher J FiscusDepartment of Botany and Plant Sciences, University of California, Riverside, Riverside, CA 92521, USA.ORCID 0000-0001-9569-1809
Ira A HerniterDepartment of Botany and Plant Sciences, University of California, Riverside, Riverside, CA 92521, USA.ORCID 0000-0001-5662-083X
Marimagne TchambaInternational Institute of Tropical Agriculture (IITA), Ibadan 200001, Nigeria.
Rajneesh PaliwalInternational Institute of Tropical Agriculture (IITA), Ibadan 200001, Nigeria.ORCID 0000-0001-6493-3289
María Muñoz-AmatriaínDepartamento de Biología Molecular, Universidad de León, León 24071, Spain.ORCID 0000-0002-4476-1691
Philip A RobertsDepartment of Nematology, University of California, Riverside, Riverside, CA 92521, USA.
Michael AbbertonInternational Institute of Tropical Agriculture (IITA), Ibadan 200001, Nigeria.ORCID 0000-0003-2555-9591
Oluwafemi AlabaDepartment of Botany and Plant Sciences, University of California, Riverside, Riverside, CA 92521, USA.ORCID 0000-0002-9089-5308
Timothy J CloseDepartment of Botany and Plant Sciences, University of California, Riverside, Riverside, CA 92521, USA.ORCID 0000-0002-9759-3775
Olaniyi OyatomiInternational Institute of Tropical Agriculture (IITA), Ibadan 200001, Nigeria.ORCID 0000-0003-3094-374X
Daniel KoenigDepartment of Botany and Plant Sciences, University of California, Riverside, Riverside, CA 92521, USA.ORCID 0000-0002-1037-5346

Funding

Crop TrustThe International Maize and Wheat Improvement Center
6 · The paper itself

Abstract

Cowpea is a highly drought-adapted leguminous crop with great promise for improving agricultural sustainability and food security. Here, we report analyses derived from array-based genotyping of 2,021 accessions constituting a core subset of the world's largest cowpea collection, held at the International Institute of Tropical Agriculture (IITA) in Ibadan, Nigeria. We used this dataset to examine genetic variation and population structure in worldwide cowpea. We confirm that the primary pattern of population structure is two geographically defined subpopulations originating in West and East Africa, respectively, and that population structure is associated with shifts in phenotypic distribution. Furthermore, we establish the cowpea core collection as a resource for genome-wide association studies by mapping the genetic basis of several phenotypes, with a focus on seed coat pigmentation patterning and color. We anticipate that the genotyped IITA Cowpea Core Collection will serve as a powerful tool for mapping complex traits, facilitating the acceleration of breeding programs to enhance the resilience of this crop in the face of rapid global climate change.

Indexed as

Genetic VariationGenotypePhenotypeVignaGenetics, PopulationGenome, PlantGenome-Wide Association StudyPolymorphism, Single NucleotideQuantitative Trait LocicowpeaGWASpopulation structureseed pigmentation

Identifiers

PMID38708794
PMCPMC11152079

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.