Evidence map›Paper›PMID 38706836›Full record

ArticleiScience2024

Morphological basis of the lung adenocarcinoma subtypes.

Linjun Zha, Toru Matsu-Ura, James P Sluka, Tomohiro Murakawa, Koji Tsuta

Abstract read
In one paragraph

Article in iScience, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Linjun ZhaDepartment of Pathology, Kansai Medical University, Hirakata, Osaka 573-0033, Japan.
Toru Matsu-UraDepartment of Pathology, Kansai Medical University, Hirakata, Osaka 573-0033, Japan.
James P SlukaBiocomplexity Institute, Indiana University, Bloomington, IN 47405-7105, USA.
Tomohiro MurakawaDepartment of Thoracic Surgery, Kansai Medical University, Hirakata, Osaka 573-0033, Japan.
Koji TsutaDepartment of Pathology, Kansai Medical University, Hirakata, Osaka 573-0033, Japan.

Funding

Dissemination of libRoadRunner and CompuCell3DU24EB028887 · NIBIB · UNIVERSITY OF WASHINGTON · PI GLAZIER, JAMES ALEXANDER, SAURO, HERBERT M. · 2019 to 2023
$1.5M
EPA RD840027NIBIB NIH HHS U24 EB028887
6 · The paper itself

Abstract

Lung adenocarcinoma (LUAD), which accounts for a large proportion of lung cancers, is divided into five major subtypes based on histologic characteristics. The clinical characteristics, prognosis, and responses to treatments vary among subtypes. Here, we demonstrate that the variations of cell-cell contact energy result in the LUAD subtype-specific morphogenesis. We reproduced the morphologies of the papillary LUAD subtypes with the cellular Potts Model (CPM). Simulations and experimental validations revealed modifications of cell-cell contact energy changed the morphology from a papillary-like structure to micropapillary or solid subtype-like structures. Remarkably, differential gene expression analysis revealed subtype-specific expressions of genes relating to cell adhesion. Knockdown experiments of the micropapillary upregulated

Indexed as

Biological sciencesCancerCellCell biology

Identifiers

PMID38706836
PMCPMC11066476

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.