Evidence map›Paper›PMID 38704672›Full record

ArticleAdvanced science (Weinheim, Baden-Wurttemberg, Germany)2024

Scanning Electron Microscopy Imaging of Large DNA Molecules Using a Metal-Free Electro-Stain Composed of DNA-Binding Proteins and Synthetic Polymers.

Chanyoung Noh, Yoonjung Kang, Sujung Heo, Taesoo Kim, Hayeon Kim, Junhyuck Chang, Priyannth Ramasami Sundharbaabu, Sanghee Shim, Kwang-Il Lim, Jung Heon Lee and 1 more

Abstract read
In one paragraph

Article in Advanced science (Weinheim, Baden-Wurttemberg, Germany), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Chanyoung NohDepartment of Chemistry, Sogang University, Seoul, 04107, South Korea.
Yoonjung KangDepartment of Chemistry, Sogang University, Seoul, 04107, South Korea.
Sujung HeoDepartment of Chemistry, Sogang University, Seoul, 04107, South Korea.
Taesoo KimDepartment of Chemistry, Sogang University, Seoul, 04107, South Korea.
Hayeon KimDepartment of Chemistry, Sogang University, Seoul, 04107, South Korea.
Junhyuck ChangSchool of Advanced Materials Science and Engineering, Department of MetaBioHealth Sungkyunkwan University (SKKU), Suwon, 16419, South Korea.
Priyannth Ramasami SundharbaabuSchool of Advanced Materials Science and Engineering, Department of MetaBioHealth Sungkyunkwan University (SKKU), Suwon, 16419, South Korea.
Sanghee ShimDepartment of Chemistry, Korea University, Seoul, 02841, South Korea.
Kwang-Il LimDepartment of Chemical and Biological Engineering, Sookmyung Women's University, Seoul, 04312, South Korea.
Jung Heon LeeSchool of Advanced Materials Science and Engineering, Department of MetaBioHealth Sungkyunkwan University (SKKU), Suwon, 16419, South Korea.
Kyubong JoDepartment of Chemistry, Sogang University, Seoul, 04107, South Korea.ORCID 0000-0002-5551-8195

Funding

Samsung Science and Technology Foundation SRFC-MA2101-07
6 · The paper itself

Abstract

This paper presents the first scanning electron microscopy (SEM)-based DNA imaging in biological samples. This novel approach incorporates a metal-free electro-stain reagent, formulated by combining DNA-binding proteins and synthetic polymers to enhance the visibility of 2-nm-thick DNA under SEM. Notably, DNA molecules stain with proteins and polymers appear as dark lines under SEM. The resulting DNA images exhibit a thickness of 15.0±4.0 nm. As SEM is the primary platform, it integrates seamlessly with various chemically functionalized large surfaces with the aid of microfluidic devices. The approach allows high-resolution imaging of various DNA structures including linear, circular, single-stranded DNA and RNA, originating from nuclear and mitochondrial genomes. Furthermore, quantum dots are successfully visualized as bright labels that are sequence-specifically incorporated into DNA molecules, which highlights the potential for SEM-based optical DNA mapping. In conclusion, DNA imaging using SEM with the novel electro-stain offers electron microscopic resolution with the ease of optical microscopy.

Indexed as

DNADNA-Binding ProteinsMicroscopy, Electron, ScanningPolymersQuantum DotsDNADNA-Binding ProteinsPolymersDNA binding proteinpolyvinylpyrrolidonequantum dot labelingSEM DNA imagingSEM optical DNA mapping

Identifiers

PMID38704672
PMCPMC11267313

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.