Evidence map›Paper›PMID 38704448›Full record

ArticleScientific reports2024

Deciphering mycobiota and its functional dynamics in root hairs of Rhododendron campanulatum D. Don through Next-gen sequencing.

Nafeesa Farooq Khan, Sheikh Sajad Ahmed, Mukhtar Iderawumi Abdulraheem, Zafar Ahmad Reshi, Abdul Wahab, Gholamreza Abdi

Abstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Nafeesa Farooq KhanBiological Invasion Lab, Department of Botany, University of Kashmir, Srinagar, Jammu & Kashmir, 190006, India. khannafeesacsiriiim@gmail.com.
Sheikh Sajad AhmedBiological Invasion Lab, Department of Botany, University of Kashmir, Srinagar, Jammu & Kashmir, 190006, India.
Mukhtar Iderawumi AbdulraheemDepartment of Electrical Engineering, Henan Agricultural University, Zhengzhou, 450002, China.
Zafar Ahmad ReshiBiological Invasion Lab, Department of Botany, University of Kashmir, Srinagar, Jammu & Kashmir, 190006, India.
Abdul WahabUniversity of Chinese Academy of Sciences, Beijing, 100049, China.
Gholamreza AbdiDepartment of Biotechnology, Persian Gul Research Institute, Persian Gulf University, Bushehr, 75169, Iran. abdi@pgu.ac.ir.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Himalayas provide unique opportunities for the extension of shrubs beyond the upper limit of the tree. However, little is known about the limitation of the biotic factors belowground of shrub growth at these cruising altitudes. To fill this gap, the present study deals with the documentation of root-associated microbiota with their predicted functional profiles and interactions in the host Rhododendron campanulatum, a krummholz species. While processing 12 root samples of R. campanulatum from the sites using Omics we could identify 134 root-associated fungal species belonging to 104 genera, 74 families, 39 orders, 17 classes, and 5 phyla. The root-associated microbiota members of Ascomycota were unambiguously dominant followed by Basidiomycota. Using FUNGuild, we reported that symbiotroph and pathotroph as abundant trophic modes. Furthermore, FUNGuild revealed the dominant prevalence of the saptroptroph guild followed by plant pathogens and wood saprotrophs. Alpha diversity was significantly different at the sites. The heatmap dendrogram showed the correlation between various soil nutrients and some fungal species. The study paves the way for a more in-depth exploration of unidentified root fungal symbionts, their interactions and their probable functional roles, which may serve as an important factor for the growth and conservation of these high-altitude ericaceous plants.

Indexed as

High-Throughput Nucleotide SequencingPlant RootsRhododendronFungiMycobiomePhylogenySoil MicrobiologySymbiosisMetabarcodingMicrobialNextGen sequencingRhododendron campanulatum

Identifiers

PMID38704448
PMCPMC11069570

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.