Evidence map›Paper›PMID 38704056›Full record

ArticleNeuroImage2024

Assessing the effectiveness of spatial PCA on SVM-based decoding of EEG data.

Guanghui Zhang, Carlos D Carrasco, Kurt Winsler, Brett Bahle, Fengyu Cong, Steven J Luck

Abstract read
In one paragraph

Article in NeuroImage, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Guanghui ZhangResearch Center of Brain and Cognitive Neuroscience, Liaoning Normal University, Dalian, Liaoning, 116029, China; Key Laboratory of Brain and Cognitive Neuroscience, Liaoning Province, Dalian, 116029, China; Center for Mind and Brain, University of California-Davis, Davis, CA, 95618, USA. Electronic address: zhang.guanghui@foxmail.com.
Carlos D CarrascoCenter for Mind and Brain, University of California-Davis, Davis, CA, 95618, USA.
Kurt WinslerCenter for Mind and Brain, University of California-Davis, Davis, CA, 95618, USA.
Brett BahleCenter for Mind and Brain, University of California-Davis, Davis, CA, 95618, USA.
Fengyu CongSchool of Biomedical Engineering, Faculty of Medicine, Dalian University of Technology, Dalian, Liaoning, 116024, China; Faculty of Information Technology, University of Jyvaskyla, Jyvaskyla, 40014, Finland; Key Laboratory of Social Computing and Cognitive Intelligence, Ministry of Education, Dalian University of Technology, Dalian, Liaoning, 116024, China.
Steven J LuckCenter for Mind and Brain, University of California-Davis, Davis, CA, 95618, USA.

Funding

ERPLAB: Extensible, open source software for analysis of event-related potentialsR01MH087450 · NIMH · UNIVERSITY OF CALIFORNIA AT DAVIS · PI LUCK, STEVEN J · 2010 to 2025
$2.7M
Learning, Memory, and Plasticity (LaMP) Training ProgramT32MH112507 · NIMH · UNIVERSITY OF CALIFORNIA AT DAVIS · PI Karen Zito · 2017 to 2026
$2.4M
Using Population Vectors to Understand Visual Working Memory for Natural StimuliR01EY033329 · NEI · UNIVERSITY OF CALIFORNIA AT DAVIS · PI LUCK, STEVEN J · 2022 to 2025
$1.8M
NEI NIH HHS R01 EY033329NIMH NIH HHS R01 MH087450NIMH NIH HHS T32 MH112507
6 · The paper itself

Abstract

Principal component analysis (PCA) has been widely employed for dimensionality reduction prior to multivariate pattern classification (decoding) in EEG research. The goal of the present study was to provide an evaluation of the effectiveness of PCA on decoding accuracy (using support vector machines) across a broad range of experimental paradigms. We evaluated several different PCA variations, including group-based and subject-based component decomposition and the application of Varimax rotation or no rotation. We also varied the numbers of PCs that were retained for the decoding analysis. We evaluated the resulting decoding accuracy for seven common event-related potential components (N170, mismatch negativity, N2pc, P3b, N400, lateralized readiness potential, and error-related negativity). We also examined more challenging decoding tasks, including decoding of face identity, facial expression, stimulus location, and stimulus orientation. The datasets also varied in the number and density of electrode sites. Our findings indicated that none of the PCA approaches consistently improved decoding performance related to no PCA, and the application of PCA frequently reduced decoding performance. Researchers should therefore be cautious about using PCA prior to decoding EEG data from similar experimental paradigms, populations, and recording setups.

Indexed as

ElectroencephalographyPrincipal Component AnalysisSupport Vector MachineAdultBrainEvoked PotentialsFemaleHumansMaleSignal Processing, Computer-AssistedYoung AdultDimensionality reductionEEGGroup-based PCAMVPASubject-based PCA

Identifiers

PMID38704056
PMCPMC11098681

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.