Evidence map›Paper›PMID 38702847›Full record

ArticleFEMS microbiology ecology2024

Light over mechanics: microbial community structure and activity in simulated migrating bedforms are controlled by oscillating light rather than by mechanical forces.

Anna Oprei, José Schreckinger, Insa Franzmann, Hayoung Lee, Michael Mutz, Ute Risse-Buhl

Abstract read
In one paragraph

Article in FEMS microbiology ecology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Anna OpreiLeibniz Institute of Freshwater Ecology and Inland Fisheries (IGB), Department of Ecohydrology and Biogeochemistry, Justus-von-Liebig-Str. 7, 12489 Berlin, Germany.ORCID 0000-0001-5529-6644
José SchreckingerBTU Cottbus-Senftenberg, Chair of Aquatic Ecology, Seestr. 45, 15526 Bad Saarow, Germany.
Insa FranzmannBTU Cottbus-Senftenberg, Chair of Aquatic Ecology, Seestr. 45, 15526 Bad Saarow, Germany.
Hayoung LeeBTU Cottbus-Senftenberg, Chair of Aquatic Ecology, Seestr. 45, 15526 Bad Saarow, Germany.
Michael MutzBTU Cottbus-Senftenberg, Chair of Aquatic Ecology, Seestr. 45, 15526 Bad Saarow, Germany.
Ute Risse-BuhlRPTU Kaiserslautern-Landau, Institute of Environmental Sciences, Fortstr. 7, 76829 Landau, Germany.

Funding

Carl Zeiss Foundation P2021-00-004German Research Foundation MU 1464/7-1
6 · The paper itself

Abstract

Sandy sediments of lowland streams are transported as migrating ripples. Benthic microorganisms colonizing sandy grains are exposed to frequent moving-resting cycles and are believed to be shaped by two dominant environmental factors: mechanical stress during the moving phase causing biofilm abrasion, and alternating light-dark cycles during the resting phase. Our study consisted of two laboratory experiments and aimed to decipher which environmental factor causes the previously observed hampered sediment-associated microbial activity and altered community structure during ripple migration. The first experiment tested the effect of three different migration velocities under comparable light conditions. The second experiment compared migrating and stationary sediments under either constant light exposure or light oscillation. We hypothesized that microbial activity and community structure would be more strongly affected by (1) higher compared to lower migration velocities, and by (2) light oscillation compared to mechanical stress. Combining the results from both experiments, we observed lower microbial activity and an altered community structure in sediments exposed to light oscillation, whereas migration velocity had less impact on community activity and structure. Our findings indicate that light oscillation is the predominating environmental factor acting during ripple migration, resulting in an increased vulnerability of light-dependent photoautotrophs and a possible shift toward heterotrophy.

Indexed as

Geologic SedimentsLightBacteriaBiofilmsMicrobiotaRiversStress, Mechanicalcommunity structurelight oscillationmetabolismmicrobial communitiesmigrating bedformsstreambed

Identifiers

PMID38702847
PMCPMC11110858

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.