Evidence map›Paper›PMID 38699060›Full record

ArticleISME communications2024

Microbial responses to long-term warming differ across soil microenvironments.

Xiao Jun A Liu, Shun Han, Serita D Frey, Jerry M Melillo, Jizhong Zhou, Kristen M DeAngelis

Abstract read
In one paragraph

Article in ISME communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Xiao Jun A LiuDepartment of Microbiology, University of Massachusetts, Amherst, MA 01003, United States.
Shun HanInstitute for Environmental Genomics and School of Biological Sciences, University of Oklahoma , Norman, OK 73019, United States.
Serita D FreyDepartment of Natural Resources and the Environment, University of New Hampshire, Durham, NH 03824, United States.
Jerry M MelilloThe Ecosystems Center, Marine Biological Laboratory, Woods Hole, MA 02543, United States.
Jizhong ZhouInstitute for Environmental Genomics and School of Biological Sciences, University of Oklahoma , Norman, OK 73019, United States.
Kristen M DeAngelisDepartment of Microbiology, University of Massachusetts, Amherst, MA 01003, United States.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Soil carbon loss is likely to increase due to climate warming, but microbiomes and microenvironments may dampen this effect. In a 30-year warming experiment, physical protection within soil aggregates affected the thermal responses of soil microbiomes and carbon dynamics. In this study, we combined metagenomic analysis with physical characterization of soil aggregates to explore mechanisms by which microbial communities respond to climate warming across different soil microenvironments. Long-term warming decreased the relative abundances of genes involved in degrading labile compounds (e.g. cellulose), but increased those genes involved in degrading recalcitrant compounds (e.g. lignin) across aggregate sizes. These changes were observed in most phyla of bacteria, especially for

Indexed as

bacterial necromassbiogeochemical cyclescarbon storage and sequestrationdegradation enzymesfunctional genomicsmicrobial evolutionorganic matter decompositionplant soil interactionssoil aggregationsubstrate accessibility

Identifiers

PMID38699060
PMCPMC11065356

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.