Evidence map›Paper›PMID 38698914›Full record

ArticleDNA2023

Kinetic Studies on the 2-Oxoglutarate/Fe(II)-Dependent Nucleic Acid Modifying Enzymes from the AlkB and TET Families.

Zhiyuan Peng, Jian Ma, Christo Z Christov, Tatyana Karabencheva-Christova, Nicolai Lehnert, Deyu Li

Abstract read
In one paragraph

Article in DNA, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Biomolecular NMR assignments · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Interconnections between mLife science alliance · 2024
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Zhiyuan PengDepartment of Biomedical and Pharmaceutical Sciences, College of Pharmacy, University of Rhode Island, Kingston, RI 02881, USA.
Jian MaDepartment of Biomedical and Pharmaceutical Sciences, College of Pharmacy, University of Rhode Island, Kingston, RI 02881, USA.
Christo Z ChristovDepartment of Chemistry, Michigan Technological University, Houghton, MI 49931, USA.
Tatyana Karabencheva-ChristovaDepartment of Chemistry, Michigan Technological University, Houghton, MI 49931, USA.
Nicolai LehnertDepartment of Chemistry and Department of Biophysics, University of Michigan, Ann Arbor, MI 48109, USA.ORCID 0000-0002-5221-5498
Deyu LiDepartment of Biomedical and Pharmaceutical Sciences, College of Pharmacy, University of Rhode Island, Kingston, RI 02881, USA.ORCID 0000-0002-1082-0569

Funding

Mutational spectra of bulky DNA lesionsR01ES028865 · NIEHS · UNIVERSITY OF RHODE ISLAND · PI LI, DEYU · 2018 to 2022
$2.1M
NIEHS NIH HHS R01 ES028865
6 · The paper itself

Abstract

Nucleic acid methylations are important genetic and epigenetic biomarkers. The formation and removal of these markers is related to either methylation or demethylation. In this review, we focus on the demethylation or oxidative modification that is mediated by the 2-oxoglutarate (2-OG)/Fe(II)-dependent AlkB/TET family enzymes. In the catalytic process, most enzymes oxidize 2-OG to succinate, in the meantime oxidizing methyl to hydroxymethyl, leaving formaldehyde and generating demethylated base. The AlkB enzyme from

Indexed as

2-OG-dependent enzymeAlkBALKBH proteinFTOkineticsTET

Identifiers

PMID38698914
PMCPMC11065319

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.