Evidence map›Paper›PMID 38698430›Full record

ArticleMicrobial cell factories2024

High production of ectoine from methane in genetically engineered Methylomicrobium alcaliphilum 20Z by preventing ectoine degradation.

Sang Eun Lim, Sukhyeong Cho, Yejin Choi, Jeong-Geol Na, Jinwon Lee

Abstract read
In one paragraph

Article in Microbial cell factories, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Review
  3. Review
  4. Review
  5. Metabolic response ofFrontiers in microbiology · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Sang Eun Lim *Department of Chemical and Biomolecular Engineering, Sogang University, Seoul, Republic of Korea.
Sukhyeong Cho *C1 Gas Refinery R&D Center, Sogang University, Seoul, Republic of Korea.
Yejin ChoiDepartment of Chemical and Biomolecular Engineering, Sogang University, Seoul, Republic of Korea.
Jeong-Geol NaDepartment of Chemical and Biomolecular Engineering, Sogang University, Seoul, Republic of Korea.
Jinwon LeeDepartment of Chemical and Biomolecular Engineering, Sogang University, Seoul, Republic of Korea. jinwonlee@sogang.ac.kr.

Funding

Ministry of Science and ICT 2015M3D3A1A01064929
6 · The paper itself

Abstract

backgroundMethane is a greenhouse gas with a significant potential to contribute to global warming. The biological conversion of methane to ectoine using methanotrophs represents an environmentally and economically beneficial technology, combining the reduction of methane that would otherwise be combusted and released into the atmosphere with the production of value-added products.

resultsIn this study, high ectoine production was achieved using genetically engineered Methylomicrobium alcaliphilum 20Z, a methanotrophic ectoine-producing bacterium, by knocking out doeA, which encodes a putative ectoine hydrolase, resulting in complete inhibition of ectoine degradation. Ectoine was confirmed to be degraded by doeA to N-α-acetyl-L-2,4-diaminobutyrate under nitrogen depletion conditions. Optimal copper and nitrogen concentrations enhanced biomass and ectoine production, respectively. Under optimal fed-batch fermentation conditions, ectoine production proportionate with biomass production was achieved, resulting in 1.0 g/L of ectoine with 16 g/L of biomass. Upon applying a hyperosmotic shock after high-cell-density culture, 1.5 g/L of ectoine was obtained without further cell growth from methane.

conclusionsThis study suggests the optimization of a method for the high production of ectoine from methane by preventing ectoine degradation. To our knowledge, the final titer of ectoine obtained by M. alcaliphilum 20ZDP3 was the highest in the ectoine production from methane to date. This is the first study to propose ectoine production from methane applying high cell density culture by preventing ectoine degradation.

Indexed as

Amino Acids, DiaminoMethaneMethylococcaceaeBacterial ProteinsBatch Cell Culture TechniquesBiomassFermentationGenetic EngineeringMetabolic EngineeringAmino Acids, DiaminoBacterial ProteinsectoineMethaneEctoineMethaneMethanotrophMethylomicrobium alcaliphilum 20ZNitrogen source

Identifiers

PMID38698430
PMCPMC11067125

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.