Evidence map›Paper›PMID 38698086›Full record

ArticleNature immunology2024

Coordinated chemokine expression defines macrophage subsets across tissues.

Xin Li, Arlind B Mara, Shawn C Musial, Fred W Kolling, Sophie L Gibbings, Nikita Gerebtsov, Claudia V Jakubzick

Abstract read
In one paragraph

Article in Nature immunology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 57 papers.

0numbers the graph read from it
0cells of the map it votes in
57citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

57 citing papers in PubMed.

  1. Article
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  9. The lung tissue environment inbioRxiv : the preprint server for biology · 2026
    Article
  10. Article
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  12. Article
  13. Article
  14. Tissue signatures of human macrophages during homeostasis and activation.Journal of immunology (Baltimore, Md. : 1950) · 2026
    Article
  15. Article
  16. Article
  17. Microbial metabolite oxindole curbs acute lung injury by suppressing CXCL13.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  18. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Xin LiDepartment of Microbiology and Immunology, Dartmouth Geisel School of Medicine, Hanover, NH, USA.ORCID http://orcid.org/0000-0002-2050-2628
Arlind B MaraDepartment of Microbiology and Immunology, Dartmouth Geisel School of Medicine, Hanover, NH, USA.ORCID http://orcid.org/0000-0001-9823-5243
Shawn C MusialDepartment of Microbiology and Immunology, Dartmouth Geisel School of Medicine, Hanover, NH, USA.ORCID http://orcid.org/0000-0002-4146-1503
Fred W KollingDartmouth Cancer Center, Dartmouth Geisel School of Medicine, Hanover, NH, USA.ORCID http://orcid.org/0000-0002-6178-9901
Sophie L GibbingsDepartment of Pediatrics, National Jewish Health, Denver, CO, USA.ORCID http://orcid.org/0000-0001-9623-0705
Nikita GerebtsovLab for Immunoregulation and Mucosal Immunology, VIB-UGent Center for Inflammation Research, Ghent, Belgium.ORCID http://orcid.org/0000-0002-9205-9194
Claudia V JakubzickDepartment of Microbiology and Immunology, Dartmouth Geisel School of Medicine, Hanover, NH, USA. claudia.jakubzick@dartmouth.edu.ORCID http://orcid.org/0000-0002-3731-0198

Funding

Translational Engineering in Cancer (TEC)P30CA023108 · NCI · DARTMOUTH COLLEGE · PI Fred W Kolling IV · 1985 to 2026
$91.3M
Zhao - Proj 2P20GM130454 · NIGMS · DARTMOUTH COLLEGE · PI Li Song · 2019 to 2026
$27.2M
IMMUNOBIOLOGY OF MYELOID AND LYMPHOID CELLST32AI007363 · NIAID · DARTMOUTH COLLEGE · PI Claudia V Jakubzick · 1990 to 2026
$9.5M
Human and mouse transcriptome profiling identifies cross-species homology of mononuclear phagocytesR35HL155458 · NHLBI · DARTMOUTH COLLEGE · PI Claudia V Jakubzick · 2021 to 2026
$5.9M
Understanding the unique role endogenous APC subtypes play during the rejection of MAg-mismatched cellsR01HL115334 · NHLBI · NATIONAL JEWISH HEALTH · PI JAKUBZICK, CLAUDIA V · 2013 to 2020
$3.3M
Functional roles of human pulmonary DC's in the lung draining lymph nodesR01HL135001 · NHLBI · NATIONAL JEWISH HEALTH · PI JAKUBZICK, CLAUDIA V · 2017 to 2020
$2.3M
Acquisition of the NextSeq2000 Sequencing platform to Increase Next Generation Sequencing Throughput While Reducing Costs at DartmouthS10OD030242 · OD · DARTMOUTH COLLEGE · PI KOLLING IV, FRED W · 2021 to 2021
$321k
10X Genomics Chromium Single-cell Sequencing to Expand Research At DartmouthS10OD025235 · OD · DARTMOUTH COLLEGE · PI TOMLINSON, CRAIG R · 2018 to 2018
$125k
NCI NIH HHS P30 CA023108NHLBI NIH HHS R01 HL115334NHLBI NIH HHS R01 HL135001NHLBI NIH HHS R35 HL155458NIAID NIH HHS T32 AI007363NIGMS NIH HHS P20 GM130454NIH HHS S10 OD025235NIH HHS S10 OD030242Universiteit Gent (UGent) BOF.MET.2021.0007.01 (Contract Nr: 01M01521)U.S. Department of Health & Human Services | National Institutes of Health (NIH) NIGMS P20GM130454U.S. Department of Health & Human Services | National Institutes of Health (NIH) NIH S10 S10OD025235U.S. Department of Health & Human Services | National Institutes of Health (NIH) S10 1S10OD030242U.S. Department of Health & Human Services | National Institutes of Health (NIH) T32AI007363U.S. Department of Health & Human Services | NIH | National Cancer Institute (NCI) 5P30CA023108
6 · The paper itself

Abstract

Lung-resident macrophages, which include alveolar macrophages and interstitial macrophages (IMs), exhibit a high degree of diversity, generally attributed to different activation states, and often complicated by the influx of monocytes into the pool of tissue-resident macrophages. To gain a deeper insight into the functional diversity of IMs, here we perform comprehensive transcriptional profiling of resident IMs and reveal ten distinct chemokine-expressing IM subsets at steady state and during inflammation. Similar IM subsets that exhibited coordinated chemokine signatures and differentially expressed genes were observed across various tissues and species, indicating conserved specialized functional roles. Other macrophage types shared specific IM chemokine profiles, while also presenting their own unique chemokine signatures. Depletion of CD206

Indexed as

ChemokinesMacrophagesAnimalsGene Expression ProfilingInflammationLungMacrophages, AlveolarMiceMice, Inbred C57BLMice, TransgenicOrgan SpecificityTertiary Lymphoid StructuresTranscriptomeChemokines

Identifiers

PMID38698086
PMCPMC11565582

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.