Evidence map›Paper›PMID 38697971›Full record

ArticleNature communications2024

HPK1 citron homology domain regulates phosphorylation of SLP76 and modulates kinase domain interaction dynamics.

Avantika S Chitre, Ping Wu, Benjamin T Walters, Xiangdan Wang, Alexandre Bouyssou, Xiangnan Du, Isabelle Lehoux, Rina Fong, Alisa Arata, Joyce Chan and 6 more

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Avantika S ChitreGenentech, Inc., 1 DNA Way, South San Francisco, CA, 94080, USA.
Ping WuGenentech, Inc., 1 DNA Way, South San Francisco, CA, 94080, USA.
Benjamin T WaltersGenentech, Inc., 1 DNA Way, South San Francisco, CA, 94080, USA.ORCID http://orcid.org/0000-0001-5400-0696
Xiangdan WangGenentech, Inc., 1 DNA Way, South San Francisco, CA, 94080, USA.
Alexandre BouyssouGenentech, Inc., 1 DNA Way, South San Francisco, CA, 94080, USA.ORCID http://orcid.org/0009-0004-9294-2229
Xiangnan DuGenentech, Inc., 1 DNA Way, South San Francisco, CA, 94080, USA.
Isabelle LehouxGenentech, Inc., 1 DNA Way, South San Francisco, CA, 94080, USA.
Rina FongGenentech, Inc., 1 DNA Way, South San Francisco, CA, 94080, USA.
Alisa ArataGenentech, Inc., 1 DNA Way, South San Francisco, CA, 94080, USA.
Joyce ChanGenentech, Inc., 1 DNA Way, South San Francisco, CA, 94080, USA.
Die WangGenentech, Inc., 1 DNA Way, South San Francisco, CA, 94080, USA.ORCID http://orcid.org/0000-0001-7628-7309
Yvonne FrankeGenentech, Inc., 1 DNA Way, South San Francisco, CA, 94080, USA.
Jane L GroganGenentech, Inc., 1 DNA Way, South San Francisco, CA, 94080, USA.ORCID http://orcid.org/0000-0003-4062-7134
Ira MellmanGenentech, Inc., 1 DNA Way, South San Francisco, CA, 94080, USA. mellman.ira@gene.com.
Laetitia Comps-AgrarGenentech, Inc., 1 DNA Way, South San Francisco, CA, 94080, USA. compsagrar.laetitia@gene.com.ORCID http://orcid.org/0000-0002-5260-6536
Weiru WangGenentech, Inc., 1 DNA Way, South San Francisco, CA, 94080, USA. weiruwang1999@gmail.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Hematopoietic progenitor kinase 1 (HPK1) is a negative regulator of T-cell receptor signaling and as such is an attractive target for cancer immunotherapy. Although the role of the HPK1 kinase domain (KD) has been extensively characterized, the function of its citron homology domain (CHD) remains elusive. Through a combination of structural, biochemical, and mechanistic studies, we characterize the structure-function of CHD in relationship to KD. Crystallography and hydrogen-deuterium exchange mass spectrometry reveal that CHD adopts a seven-bladed β-propellor fold that binds to KD. Mutagenesis associated with binding and functional studies show a direct correlation between domain-domain interaction and negative regulation of kinase activity. We further demonstrate that the CHD provides stability to HPK1 protein in cells as well as contributes to the docking of its substrate SLP76. Altogether, this study highlights the importance of the CHD in the direct and indirect regulation of HPK1 function.

Indexed as

Adaptor Proteins, Signal TransducingProtein Serine-Threonine KinasesCrystallography, X-RayHEK293 CellsHumansPhosphoproteinsPhosphorylationProtein BindingProtein DomainsAdaptor Proteins, Signal Transducinghematopoietic progenitor kinase 1PhosphoproteinsProtein Serine-Threonine KinasesSLP-76 signal Transducing adaptor proteins

Identifiers

PMID38697971
PMCPMC11066036

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.