Evidence map›Paper›PMID 38694509›Full record

ArticleFrontiers in immunology2024

Identification of extracellular matrix-related biomarkers in colon adenocarcinoma by bioinformatics and experimental validation.

Yongkui Yin, Xiaojie Yang, Zhengyi Cheng, Hui Wang, Jun Lei, Dan Wang, Peiwen Wang, Biao Li, Jing Mi, Qi Yuan

Open access · goldAbstract read
In one paragraph

Article in Frontiers in immunology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
5.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Yongkui Yin *College of Life Science, Mudanjiang Medical University, Mudanjiang, China.
Xiaojie Yang *College of Life Science, Mudanjiang Medical University, Mudanjiang, China.
Zhengyi Cheng *Department of Pathology, Xi'an No.3 Hospital, The Affiliated Hospital of Northwest University, Xi'an, China.
Hui WangDepartment of Rheumatology and Immunology, Tangdu Hospital of The Air Force Medical University, Xi'an, China.
Jun LeiDepartment of Assets Management, Mudanjiang Medical University, Mudanjiang, China.
Dan WangCollege of Life Science, Mudanjiang Medical University, Mudanjiang, China.
Peiwen WangCollege of Life Science, Mudanjiang Medical University, Mudanjiang, China.
Biao LiCollege of Life Science, Mudanjiang Medical University, Mudanjiang, China.
Jing MiCollege of Life Science, Mudanjiang Medical University, Mudanjiang, China.
Qi YuanCollege of Life Science, Mudanjiang Medical University, Mudanjiang, China.
Mudanjiang Medical University · CNAir Force Medical University · CNNorthwest University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Backgrounds: Extracellular matrix (ECM) is an important component of tumor microenvironment, and its abnormal expression promotes tumor formation, progression and metastasis. Methods: Weighted gene co-expression network analysis (WGCNA) was used to identify ECM-related hub genes based on The Cancer Genome Atlas (TCGA) colon adenocarcinoma (COAD) data. COAD clinical samples were used to verify the expression of potential biomarkers in tumor tissues, and siRNA was used to explore the role of potential biomarkers in cell proliferation and epithelial-mesenchymal transition (EMT). Results: Three potential biomarkers ( Conclusion: The three biomarkers can provide new ideas for the diagnosis and targeted therapy of COAD patients.

Indexed as

AdenocarcinomaBiomarkers, TumorColonic NeoplasmsComputational BiologyEpithelial-Mesenchymal TransitionExtracellular MatrixAnimalsCell Line, TumorCell ProliferationGene Expression ProfilingGene Expression Regulation, NeoplasticGene Regulatory NetworksHumansMaleMiceMolecular Docking SimulationBiomarkers, Tumorcolon adenocarcinomaextracellular matrixprognosistumor microenvironmentWGCNA

Identifiers

PMID38694509
PMCPMC11061380
OpenAlexW4394889150

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.