Evidence map›Paper›PMID 38693493›Full record

ArticleBMC plant biology2024

Myrosinase isogenes in wasabi (Wasabia japonica Matsum) and their putative roles in glucosinolate metabolism.

To Quyen Truong, Yun Ji Park, Je-Seung Jeon, Jaeyoung Choi, Song Yi Koo, Yeong Bin Choi, Phuong Kim Huynh, Jinyoung Moon, Sang Min Kim

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in BMC plant biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 45% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

To Quyen TruongDivision of Bio-Medical Science & Technology, Korea Institute of Science and Technology (KIST), University of Science and Technology, Seoul, 02792, Republic of Korea.
Yun Ji ParkSmart Farm Research Center, KIST Gangneung Institute of Natural Products, Gangneung, 25451, Republic of Korea.
Je-Seung JeonDepartment of Herbal Crop Research, National Institute of Horticultural and Herbal Science, RDA, Eumseong, 27709, Republic of Korea.
Jaeyoung ChoiDepartment of Oriental Medicine Biotechnology, College of Life Sciences, Kyung Hee University, Yongin, 17104, Republic of Korea.
Song Yi KooNatural Product Informatics Research Center, KIST Gangneung Institute of Natural Products, Gangneung, 25451, Republic of Korea.
Yeong Bin ChoiSmart Farm Research Center, KIST Gangneung Institute of Natural Products, Gangneung, 25451, Republic of Korea.
Phuong Kim HuynhDivision of Bio-Medical Science & Technology, Korea Institute of Science and Technology (KIST), University of Science and Technology, Seoul, 02792, Republic of Korea.
Jinyoung MoonSmart Farm Research Center, KIST Gangneung Institute of Natural Products, Gangneung, 25451, Republic of Korea.
Sang Min KimDivision of Bio-Medical Science & Technology, Korea Institute of Science and Technology (KIST), University of Science and Technology, Seoul, 02792, Republic of Korea. kimsm@kist.re.kr.
Korean Association Of Science and Technology Studies · KRGangneung–Wonju National University · KRKyung Hee University · KRRural Development Administration · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundWasabi, a Brassicaceae member, is well-known for its unique pungent and hot flavor which is produced from glucosinolate (GSL) degradation. Myrosinase (MYR) is a principle enzyme catalyzing the primary conversion of GSLs to GSL hydrolysis products (GHPs) which is responsible for plant defense system and food quality. Due to the limited information in relation to MYRs present in wasabi (Wasabia japonica M.), this study aimed to identify the MYR isogenes in W. japonica and analyze their roles in relation to GSL metabolism.

resultsIn results, WjMYRI-1 was abundantly expressed in all organs, whereas WjMYRI-2 showed only trace expression levels. WjMYRII was highly expressed in the aboveground tissues. Interestingly, WjMYRII expression was significantly upregulated by certain abiotic factors, such as methyl jasmonate (more than 40-fold in petioles and 15-fold in leaves) and salt (tenfold in leaves). Young leaves and roots contained 97.89 and 91.17 µmol‧g

conclusionsIn conclusions, three potential isogenes (WjMYRI-1, WjMYRI-2, and WjMYRII) encoding for different MYR isoforms in W. japonica were identified. Our results provided new insights related to MYR and GSL metabolism which are important for the implications of wasabi in agriculture, food and pharmaceutical industry. Particularly, WjMYRI-1 may be primarily responsible for GSL degradation, whereas WjMYRII (clade II) may be involved in other regulatory pathways induced by abiotic factors.

Indexed as

AcetatesGlucosinolatesGlycoside HydrolasesBrassicaceaeCyclopentanesGene Expression Regulation, PlantOxylipinsPlant LeavesPlant ProteinsAcetatesCyclopentanesGlucosinolatesGlycoside Hydrolasesmethyl jasmonateOxylipinsPlant ProteinsthioglucosidaseAbiotic stressGlucosinolate hydrolysis productsGlucosinolatesGSL-MYR defense systemMethyl jasmonateMyrosinaseWasabia japonica

Identifiers

PMID38693493
PMCPMC11061951
OpenAlexW4396546324

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.