Evidence map›Paper›PMID 38692274›Full record

ArticleCell systems2024

Combinatorial interpretation of BMP and WNT controls the decision between primitive streak and extraembryonic fates.

Elena Camacho-Aguilar, Sumin T Yoon, Miguel A Ortiz-Salazar, Siqi Du, M Cecilia Guerra, Aryeh Warmflash

Open access · greenAbstract read
In one paragraph

Article in Cell systems, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
7.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 35 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Article
  7. Non-Canonical MaternalBiology · 2026
    Article
  8. Article
  9. Article
  10. Article
  11. Optogenetic Rescue Reveals Spatiotemporal Rules of Germ-Layer Patterning.bioRxiv : the preprint server for biology · 2025
    Article
  12. Article
  13. Article
  14. Dynamical systems of fate and form in development.Seminars in cell & developmental biology · 2025
    Review
  15. Article
  16. Article
  17. Optogenetic control of Nodal signaling patterns.Development (Cambridge, England) · 2025
    Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Elena Camacho-AguilarDepartment of Biosciences, Rice University, Houston, TX 77005, USA. Electronic address: ecamagu@upo.es.
Sumin T YoonDepartment of Biosciences, Rice University, Houston, TX 77005, USA.
Miguel A Ortiz-SalazarDepartment of Biosciences, Rice University, Houston, TX 77005, USA.
Siqi DuDepartment of Biosciences, Rice University, Houston, TX 77005, USA.
M Cecilia GuerraDepartment of Biosciences, Rice University, Houston, TX 77005, USA.
Aryeh WarmflashDepartment of Biosciences, Rice University, Houston, TX 77005, USA; Department of Bioengineering, Rice University, Houston, TX 77005, USA. Electronic address: aryeh.warmflash@rice.edu.
Rice University · US

Funding

Signaling dynamics in the control of ectoderm patterning and morphogenesisR35GM149328 · NIGMS · RICE UNIVERSITY · PI Aryeh Warmflash · 2023 to 2026
$1.5M
NIGMS NIH HHS R35 GM149328
6 · The paper itself

Abstract

BMP signaling is essential for mammalian gastrulation, as it initiates a cascade of signals that control self-organized patterning. As development is highly dynamic, it is crucial to understand how time-dependent combinatorial signaling affects cellular differentiation. Here, we show that BMP signaling duration is a crucial control parameter that determines cell fates upon the exit from pluripotency through its interplay with the induced secondary signal WNT. BMP signaling directly converts cells from pluripotent to extraembryonic fates while simultaneously upregulating Wnt signaling, which promotes primitive streak and mesodermal specification. Using live-cell imaging of signaling and cell fate reporters together with a simple mathematical model, we show that this circuit produces a temporal morphogen effect where, once BMP signal duration is above a threshold for differentiation, intermediate and long pulses of BMP signaling produce specification of mesoderm and extraembryonic fates, respectively. Our results provide a systems-level picture of how these signaling pathways control the landscape of early human development.

Indexed as

Bone Morphogenetic ProteinsCell DifferentiationPrimitive StreakSignal TransductionAnimalsGastrulationGene Expression Regulation, DevelopmentalHumansMesodermWnt ProteinsWnt Signaling PathwayBone Morphogenetic ProteinsWnt Proteinscell differentiationembryonic stem cellsgastrulationlive-cell imagingmathematical modelingregulatory networksignaling

Identifiers

PMID38692274
PMCPMC11231731
OpenAlexW4396532763

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.