Evidence map›Paper›PMID 38689115›Full record

ArticleJournal of neuro-oncology2024

Leveraging radiomics and machine learning to differentiate radiation necrosis from recurrence in patients with brain metastases.

Mustafa M Basree, Chengnan Li, Hyemin Um, Anthony H Bui, Manlu Liu, Azam Ahmed, Pallavi Tiwari, Alan B McMillan, Andrew M Baschnagel

Abstract read
In one paragraph

Article in Journal of neuro-oncology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
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  5. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Mustafa M BasreeDeparment of Human Oncology, University of Wisconsin, Madison, WI, USA.
Chengnan LiDepartment of Computer Science, University of Wisconsin, Madison, WI, USA.
Hyemin UmDepartment of Radiology, University of Wisconsin, Madison, WI, USA.
Anthony H BuiSchool of Medicine and Public Health, University of Wisconsin, Madison, WI, USA.
Manlu LiuSchool of Medicine and Public Health, University of Wisconsin, Madison, WI, USA.
Azam AhmedDepartment of Neurological Surgery, University of Wisconsin, Madison, WI, USA.
Pallavi TiwariDepartment of Radiology, University of Wisconsin, Madison, WI, USA.
Alan B McMillanDepartment of Radiology, University of Wisconsin, Madison, WI, USA. amcmillan@uwhealth.org.
Andrew M BaschnagelSchool of Medicine and Public Health, University of Wisconsin, Madison, WI, USA. baschnagel@humonc.wisc.edu.

Funding

UW COMPREHENSIVE CANCER CENTER SUPPORTP30CA014520 · NCI · UNIVERSITY OF WISCONSIN-MADISON · PI Christian Capitini · 1985 to 2026
$142.6M
Radiomic spatial maps for identifying viable tumor extent on multi-parametric MRI for GlioblastomaR01CA277728 · NCI · UNIVERSITY OF WISCONSIN-MADISON · PI Manmeet Ahluwalia, Pallavi Tiwari · 2024 to 2026
$3.0M
Quantitative imaging phenotypic classifier for distinguishing radiation effects from tumor recurrence in Glioblastoma .R01CA264017 · NCI · UNIVERSITY OF WISCONSIN-MADISON · PI Manmeet Ahluwalia, Pallavi Tiwari · 2022 to 2026
$2.9M
RadxTools for assessing tumor treatment response on imagingU01CA248226 · NCI · CASE WESTERN RESERVE UNIVERSITY · PI TIWARI, PALLAVI, VISWANATH, SATISH EASWAR · 2020 to 2022
$1.4M
Can machines be trusted? Robustification of deep learning for medical imagingR01LM013151 · NLM · UNIVERSITY OF WISCONSIN-MADISON · PI GARRETT, JOHN WILLIAM, MCMILLAN, ALAN BLAIR · 2020 to 2023
$1.3M
BLRD VA I01 BX005842NCI NIH HHS P30 CA014520NCI NIH HHS R01 CA264017NCI NIH HHS R01 CA277728NCI NIH HHS U01 CA248226NIH HHS NIH R01LM013151NLM NIH HHS R01 LM013151
6 · The paper itself

Abstract

objectiveRadiation necrosis (RN) can be difficult to radiographically discern from tumor progression after stereotactic radiosurgery (SRS). The objective of this study was to investigate the utility of radiomics and machine learning (ML) to differentiate RN from recurrence in patients with brain metastases treated with SRS.

methodsPatients with brain metastases treated with SRS who developed either RN or tumor reccurence were retrospectively identified. Image preprocessing and radiomic feature extraction were performed using ANTsPy and PyRadiomics, yielding 105 features from MRI T1-weighted post-contrast (T1c), T2, and fluid-attenuated inversion recovery (FLAIR) images. Univariate analysis assessed significance of individual features. Multivariable analysis employed various classifiers on features identified as most discriminative through feature selection. ML models were evaluated through cross-validation, selecting the best model based on area under the receiver operating characteristic (ROC) curve (AUC). Specificity, sensitivity, and F1 score were computed.

resultsSixty-six lesions from 55 patients were identified. On univariate analysis, 27 features from the T1c sequence were statistically significant, while no features were significant from the T2 or FLAIR sequences. For clinical variables, only immunotherapy use after SRS was significant. Multivariable analysis of features from the T1c sequence yielded an AUC of 76.2% (standard deviation [SD] ± 12.7%), with specificity and sensitivity of 75.5% (± 13.4%) and 62.3% (± 19.6%) in differentiating radionecrosis from recurrence.

conclusionsRadiomics with ML may assist the diagnostic ability of distinguishing RN from tumor recurrence after SRS. Further work is needed to validate this in a larger multi-institutional cohort and prospectively evaluate it's utility in patient care.

Indexed as

Brain NeoplasmsMachine LearningMagnetic Resonance ImagingNecrosisNeoplasm Recurrence, LocalRadiation InjuriesAdultAgedAged, 80 and overDiagnosis, DifferentialFemaleHumansMaleMiddle AgedRadiomicsRadiosurgeryBrain metastasisMachine learningQuantitative imagingRadiation necrosisRadiomicsStereotactic radiosurgery

Identifiers

PMID38689115
PMCPMC12188870

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.