Evidence map›Paper›PMID 38687435›Full record

ArticleGenes & genomics2024

Optimizing Bangkaew dog breed identification using DNA technology.

Chananya Patta, Worapong Singchat, Chadaphon Thatukan, Wattanawan Jaito, Nichakorn Kumnan, Piangjai Chalermwong, Thitipong Panthum, Trifan Budi, Wongsathit Wongloet, Pish Wattanadilokchatkun and 7 more

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Article in Genes & genomics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

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0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Chananya PattaAnimal Genomics and Bioresource Research Unit (AGB Research Unit), Faculty of Science, Kasetsart University, 50 Ngamwongwan, Chatuchak, 10900, Bangkok, Thailand.
Worapong SingchatAnimal Genomics and Bioresource Research Unit (AGB Research Unit), Faculty of Science, Kasetsart University, 50 Ngamwongwan, Chatuchak, 10900, Bangkok, Thailand.
Chadaphon ThatukanAnimal Genomics and Bioresource Research Unit (AGB Research Unit), Faculty of Science, Kasetsart University, 50 Ngamwongwan, Chatuchak, 10900, Bangkok, Thailand.
Wattanawan JaitoAnimal Genomics and Bioresource Research Unit (AGB Research Unit), Faculty of Science, Kasetsart University, 50 Ngamwongwan, Chatuchak, 10900, Bangkok, Thailand.
Nichakorn KumnanAnimal Genomics and Bioresource Research Unit (AGB Research Unit), Faculty of Science, Kasetsart University, 50 Ngamwongwan, Chatuchak, 10900, Bangkok, Thailand.
Piangjai ChalermwongAnimal Genomics and Bioresource Research Unit (AGB Research Unit), Faculty of Science, Kasetsart University, 50 Ngamwongwan, Chatuchak, 10900, Bangkok, Thailand.
Thitipong PanthumAnimal Genomics and Bioresource Research Unit (AGB Research Unit), Faculty of Science, Kasetsart University, 50 Ngamwongwan, Chatuchak, 10900, Bangkok, Thailand.
Trifan BudiAnimal Genomics and Bioresource Research Unit (AGB Research Unit), Faculty of Science, Kasetsart University, 50 Ngamwongwan, Chatuchak, 10900, Bangkok, Thailand.
Wongsathit WongloetAnimal Genomics and Bioresource Research Unit (AGB Research Unit), Faculty of Science, Kasetsart University, 50 Ngamwongwan, Chatuchak, 10900, Bangkok, Thailand.
Pish WattanadilokchatkunAnimal Genomics and Bioresource Research Unit (AGB Research Unit), Faculty of Science, Kasetsart University, 50 Ngamwongwan, Chatuchak, 10900, Bangkok, Thailand.
Thanyapat ThongAnimal Genomics and Bioresource Research Unit (AGB Research Unit), Faculty of Science, Kasetsart University, 50 Ngamwongwan, Chatuchak, 10900, Bangkok, Thailand.
Syed Farhan AhmadAnimal Genomics and Bioresource Research Unit (AGB Research Unit), Faculty of Science, Kasetsart University, 50 Ngamwongwan, Chatuchak, 10900, Bangkok, Thailand.
Narongrit MuangmaiAnimal Genomics and Bioresource Research Unit (AGB Research Unit), Faculty of Science, Kasetsart University, 50 Ngamwongwan, Chatuchak, 10900, Bangkok, Thailand.
Kyudong HanAnimal Genomics and Bioresource Research Unit (AGB Research Unit), Faculty of Science, Kasetsart University, 50 Ngamwongwan, Chatuchak, 10900, Bangkok, Thailand.
Prateep DuengkaeAnimal Genomics and Bioresource Research Unit (AGB Research Unit), Faculty of Science, Kasetsart University, 50 Ngamwongwan, Chatuchak, 10900, Bangkok, Thailand.
Rattanin PhatcharakullawarawatMind Pets Animal Hospital, 169/10 Khlongsongtonnun, Latkrabang, 10520, Bangkok, Thailand.
Kornsorn SrikulnathAnimal Genomics and Bioresource Research Unit (AGB Research Unit), Faculty of Science, Kasetsart University, 50 Ngamwongwan, Chatuchak, 10900, Bangkok, Thailand. kornsorn.s@ku.ac.th.ORCID 0000-0002-5985-7258

Funding

Higher Education for Industry Consortium (Hi-FI) (6514400892)Higher Education for Industry Consortium (Hi-FI) (6514400906)Higher Education for Industry Consortium (Hi-FI) (6514400914)Higher Education for Industry Consortium (Hi-FI) (6514400931)Higher Education for Industry Consortium (Hi-FI) (6514400949)Kasetsart University Research and Development Institute (FF(KU)25.64Kasetsart University Research and Development Institute FF(KU)25.64)Thailand Science Research and Innovation (TSRI) (3/2564)
6 · The paper itself

Abstract

backgroundThe Bangkaew dog is an indigenous dog breed in the Phitsanulok province of Thailand. This breed is recognized by the Fédération Cynologique Internationale (FCI), a global canine organization. The unique traits of the Bangkaew breed lead to purebred selection for breeding, while only their traits and pedigree from parental history are recorded. Determination of the risk of inbreeding depression and the origin of unknown DNA profiles is essential due to the challenges in predicting puppy characteristics, which are crucial for breed management and conservation.

objectiveThis study aimed to emphasize that current allelic frequency data for the Bangkaew dog breed must be considered for precise individual identification.

methodsApproximately 82 Bangkaew dogs from various Thai localities were studied using 15 microsatellite markers for genotypic monitoring and individual identification. Maternal genetic inheritance was assessed via mtDNA D-loop analysis.

resultsThe results revealed high genetic diversity in the Bangkaew breed, indicating low potential for inbreeding. We also found that using a 15 loci microsatellite panel was effective for the identification of Bangkaew dogs. The optimized 10 loci microsatellite genotyping panel developed in this study presents improved identification testing efficiency, promoting both time- and cost-effectiveness.

conclusionAnalysis of microsatellite DNA markers in Bangkaew dogs using an optimized panel of 10 loci selected from 15 loci effectively facilitated individual identification. This approach not only enhances time and cost efficiency, but also provides accurate allelic frequency estimates, which are crucial for the realistic evaluation of DNA evidence.

Indexed as

Microsatellite RepeatsAnimalsBreedingDNA, MitochondrialDogsFemaleGene FrequencyGenetic VariationGenotypeGenotyping TechniquesMalePedigreeThailandDNA, MitochondrialBangkaew dogDogGenetic diversityIndividual identificationMicrosatellite

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.