Evidence map›Paper›PMID 38687251›Full record

ArticleAlzheimer's & dementia : the journal of the Alzheimer's Association2024

In vivo validation of late-onset Alzheimer's disease genetic risk factors.

Michael Sasner, Christoph Preuss, Ravi S Pandey, Asli Uyar, Dylan Garceau, Kevin P Kotredes, Harriet Williams, Adrian L Oblak, Peter Bor-Chian Lin, Bridget Perkins and 6 more

Abstract read
In one paragraph

Article in Alzheimer's & dementia : the journal of the Alzheimer's Association, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Trem2bioRxiv : the preprint server for biology · 2025
    Article
  5. WSB.bioRxiv : the preprint server for biology · 2025
    Article
  6. Review
  7. In vivo validation of late-onset Alzheimer's disease genetic risk factors.Alzheimer's & dementia : the journal of the Alzheimer's Association · 2024
    Article
4 · The record

Corrections and comments

  • Update of
    2023
5 · Who and what money

Authors and funding

16 authors.

Michael SasnerThe Jackson Laboratory, Bar Harbor, Maine, USA.
Christoph PreussThe Jackson Laboratory, Bar Harbor, Maine, USA.
Ravi S PandeyThe Jackson Laboratory for Genomic Medicine, Farmington, Connecticut, USA.
Asli UyarThe Jackson Laboratory for Genomic Medicine, Farmington, Connecticut, USA.
Dylan GarceauThe Jackson Laboratory, Bar Harbor, Maine, USA.
Kevin P KotredesThe Jackson Laboratory, Bar Harbor, Maine, USA.
Harriet WilliamsThe Jackson Laboratory, Bar Harbor, Maine, USA.
Adrian L OblakStark Neurosciences Research Institute, School of Medicine, Indiana University, Indianapolis, Indiana, USA.
Peter Bor-Chian LinStark Neurosciences Research Institute, School of Medicine, Indiana University, Indianapolis, Indiana, USA.
Bridget PerkinsStark Neurosciences Research Institute, School of Medicine, Indiana University, Indianapolis, Indiana, USA.
Disha SoniStark Neurosciences Research Institute, School of Medicine, Indiana University, Indianapolis, Indiana, USA.
Cindy IngrahamStark Neurosciences Research Institute, School of Medicine, Indiana University, Indianapolis, Indiana, USA.
Audrey Lee-GosselinStark Neurosciences Research Institute, School of Medicine, Indiana University, Indianapolis, Indiana, USA.
Bruce T LambStark Neurosciences Research Institute, School of Medicine, Indiana University, Indianapolis, Indiana, USA.
Gareth R HowellThe Jackson Laboratory, Bar Harbor, Maine, USA.
Gregory W CarterThe Jackson Laboratory, Bar Harbor, Maine, USA.

Funding

The IU/JAX Alzheimer's Disease Precision Models Center: Rat F344U54AG054345 · NIA · INDIANA UNIVERSITY INDIANAPOLIS · PI Bruce T Lamb · 2016 to 2026
$95.6M
Vascular Structure and Function in Cognitive AgingP01AG003949 · NIA · YESHIVA UNIVERSITY · PI Charles B Hall · 1985 to 2026
$73.9M
TREAT AD Structural Biology CoreU54AG065187 · NIA · EMORY UNIVERSITY · PI Gregory W Carter, ALLAN I LEVEY · 2019 to 2026
$69.7M
SUPPLEMENT TO ALZHEIMERS DISEASE PATIENT REGISTRYU01AG006786 · NIA · MAYO CLINIC ROCHESTER · PI GRAFF-RADFORD, JONATHAN, JACK, CLIFFORD R. · 1986 to 2023
$49.6M
SUPPLEMENT TO RUSH ALZHEIMERS DISEASE CENTER COREP30AG010161 · NIA · RUSH UNIVERSITY MEDICAL CENTER · PI LEURGANS, SUE E. · 1991 to 2020
$49.1M
EPIDEMIOLOGY OF NEURAL RESERVE AND NEUROBIOLOGY IN AGINGR01AG017917 · NIA · RUSH UNIVERSITY MEDICAL CENTER · PI BENNETT, DAVID ALAN · 2001 to 2023
$43.3M
THE PGRN/TDP-43 AXIS IN ALZHEIMER?S DISEASE AND NEURODEGENERATIONP50AG016574 · NIA · MAYO CLINIC ROCHESTER · PI PETERSEN, RONALD C · 1999 to 2018
$36.9M
Research Education ComponentP30AG019610 · NIA · SUN HEALTH RESEARCH INSTITUTE · PI REIMAN, ERIC MICHAEL · 2001 to 2020
$32.5M
Research Education ComponentP30AG072980 · NIA · BANNER HEALTH · PI Nicholas Ashton · 2021 to 2026
$24.9M
Integrating the exposome and methylome to inform brain molecular changes in ADRD across established diverse cohorts.U01AG046139 · NIA · UNIVERSITY OF FLORIDA · PI ERTEKIN-TANER, NILUFER, FUNK, CORY · 2013 to 2022
$24.6M
RISK FACTORS, PATHOLOGY, AND CLINICAL EXPRESSIONS OF ADR01AG015819 · NIA · RUSH UNIVERSITY MEDICAL CENTER · PI BENNETT, DAVID ALAN · 1998 to 2024
$21.4M
TRANSGENIC MODELING OF TAUOPATHYP01AG017216 · NIA · MAYO CLINIC JACKSONVILLE · PI DICKSON, DENNIS WILLIAM · 1999 to 2011
$12.0M
NIA NIH HHS P01 AG003949NIA NIH HHS P01 AG017216NIA NIH HHS P30 AG010161NIA NIH HHS P30 AG019610NIA NIH HHS P30 AG072980NIA NIH HHS P50 AG016574NIA NIH HHS P50 AG025711NIA NIH HHS R01 AG015819NIA NIH HHS R01 AG017917NIA NIH HHS R01 AG018023NIA NIH HHS R01 AG032990NIA NIH HHS R01 AG036836NIA NIH HHS U01 AG006786NIA NIH HHS U01 AG046139NIA NIH HHS U54 AG054345NIA NIH HHS U54AG054345NIA NIH HHS U54 AG065187NINDS NIH HHS R01 NS080820NINDS NIH HHS U24 NS072026
6 · The paper itself

Abstract

introductionGenome-wide association studies have identified over 70 genetic loci associated with late-onset Alzheimer's disease (LOAD), but few candidate polymorphisms have been functionally assessed for disease relevance and mechanism of action.

methodsCandidate genetic risk variants were informatically prioritized and individually engineered into a LOAD-sensitized mouse model that carries the AD risk variants APOE ε4/ε4 and Trem2*R47H. The potential disease relevance of each model was assessed by comparing brain transcriptomes measured with the Nanostring Mouse AD Panel at 4 and 12 months of age with human study cohorts.

resultsWe created new models for 11 coding and loss-of-function risk variants. Transcriptomic effects from multiple genetic variants recapitulated a variety of human gene expression patterns observed in LOAD study cohorts. Specific models matched to emerging molecular LOAD subtypes. DISCUSSION: These results provide an initial functionalization of 11 candidate risk variants and identify potential preclinical models for testing targeted therapeutics. HIGHLIGHTS: A novel approach to validate genetic risk factors for late-onset AD (LOAD) is presented. LOAD risk variants were knocked in to conserved mouse loci. Variant effects were assayed by transcriptional analysis. Risk variants in Abca7, Mthfr, Plcg2, and Sorl1 loci modeled molecular signatures of clinical disease. This approach should generate more translationally relevant animal models.

Indexed as

Alzheimer DiseaseDisease Models, AnimalGenetic Predisposition to DiseaseMice, TransgenicAnimalsBrainFemaleGenome-Wide Association StudyHumansMaleMiceRisk FactorsAbca7Alzheimer's diseaseanimal modelsAPOE4Plcg2. MthfrpreclinicalSorl1transcriptomic analysisTrem2

Identifiers

PMID38687251
PMCPMC11247676

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.