Evidence map›Paper›PMID 38687034›Full record

ArticleJournal of bacteriology2024

Targeted deletion of Pf prophages from diverse

Amelia K Schmidt, Caleb M Schwartzkopf, Julie D Pourtois, Elizabeth B Burgener, Dominick R Faith, Alex Joyce, Tyrza Lamma, Geetha Kumar, Paul L Bollyky, Patrick R Secor

Abstract read
In one paragraph

Article in Journal of bacteriology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Phage-Mediated Iron Acquisition bybioRxiv : the preprint server for biology · 2026
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. bioRxiv : the preprint server for biology · 2025
    Article
  12. Multidrug-resistantFrontiers in microbiology · 2025
    Review
  13. The lysogenic filamentousPNAS nexus · 2024
    Article
  14. 'Wild Type'.Microbiology (Reading, England) · 2024
    Review
  15. Review
  16. Polymicrobial interactions influenceFrontiers in microbiology · 2024
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors.

Amelia K SchmidtDivision of Biological Sciences, University of Montana, Missoula, Montana, USA.
Caleb M SchwartzkopfDivision of Biological Sciences, University of Montana, Missoula, Montana, USA.
Julie D PourtoisDepartment of Medicine, Division of Infectious Diseases and Geographic Medicine, Stanford University School of Medicine, Stanford, California, USA.ORCID 0000-0002-6939-2909
Elizabeth B BurgenerDivision of Pediatric Pulmonology and Sleep Medicine, Children's Hospital of Los Angeles, Keck School of Medicine, University of Southern California, Los Angeles, California, USA.
Dominick R FaithDivision of Biological Sciences, University of Montana, Missoula, Montana, USA.
Alex JoyceDivision of Biological Sciences, University of Montana, Missoula, Montana, USA.
Tyrza LammaDivision of Biological Sciences, University of Montana, Missoula, Montana, USA.
Geetha KumarSchool of Biotechnology, Amrita Vishwa Vidyapeetham, Amritapuri, Kerala, India.ORCID 0000-0002-4584-6929
Paul L BollykyDepartment of Medicine, Division of Infectious Diseases and Geographic Medicine, Stanford University School of Medicine, Stanford, California, USA.
Patrick R SecorDivision of Biological Sciences, University of Montana, Missoula, Montana, USA.ORCID 0000-0001-7123-3037

Funding

Surveillance genome sequencing to detect SARS-CoV-2 virus variants in MontanaP20GM103546 · NIGMS · UNIVERSITY OF MONTANA · PI BOWLER, BRUCE E · 2012 to 2021
$19.2M
Immunization against filamentous bacteriophages to prevent bacterial infectionR01AI138981 · NIAID · UNIVERSITY OF MONTANA · PI EVANS, JAY T. · 2018 to 2022
$5.4M
Non-invasive Monitoring for Infections and Rejection after Lung TransplantationR01AI182349 · NIAID · STANFORD UNIVERSITY · PI Paul L Bollyky · 2024 to 2026
$1.8M
Pathogenesis of Pf Bacteriophages in Pseudomonas Cystic Fibrosis lung InfectionsR01HL148184 · NHLBI · STANFORD UNIVERSITY · PI MILLA, CARLOS · 2019 to 2022
$1.7M
Studies on bacteriophages in respiratory diseasesK24AI166718 · NIAID · STANFORD UNIVERSITY · PI Paul L Bollyky · 2022 to 2026
$815k
HHS | NIH | National Institute of Allergy and Infectious Diseases (NIAID) R01AI138981HHS | NIH | National Institute of General Medical Sciences (NIGMS) P20GM103546NHLBI NIH HHS R01 HL148184NIAID NIH HHS K24 AI166718NIAID NIH HHS R01 AI138981NIAID NIH HHS R01 AI182349NIGMS NIH HHS P20 GM103546NSF | National Science Foundation Graduate Research Fellowship Program (GRFP) 366502
6 · The paper itself

Abstract

PubMed holds no abstract for this paper.

Indexed as

ProphagesPseudomonas aeruginosaQuorum SensingBiofilmsCaenorhabditis elegansLysogenyPseudomonas InfectionsPseudomonas PhagesVirulencebiofilmsC. elegansFilamentous Pf bacteriophageprophagePseudomonas aeruginosapyocyaninquorum sensingvirulence

Identifiers

PMID38687034
PMCPMC11112994

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.