Evidence map›Paper›PMID 38687030›Full record

ArticlemSystems2024

A library of reporters of the global regulators of gene expression in

Suchintak Dash, Rahul Jagadeesan, Ines S C Baptista, Vatsala Chauhan, Vinodh Kandavalli, Samuel M D Oliveira, Andre S Ribeiro

Abstract read
In one paragraph

Article in mSystems, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Thermal Shifts Dominate Single-Gene Responses to Transcription-Targeting Antibiotics.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Suchintak DashFaculty of Medicine and Health Technology, Tampere University, Tampere, Finland.ORCID 0000-0003-2108-5448
Rahul JagadeesanFaculty of Medicine and Health Technology, Tampere University, Tampere, Finland.
Ines S C BaptistaFaculty of Medicine and Health Technology, Tampere University, Tampere, Finland.
Vatsala ChauhanFaculty of Medicine and Health Technology, Tampere University, Tampere, Finland.
Vinodh KandavalliDepartment of Cell and Molecular Biology, Uppsala University, Uppsala, Sweden.
Samuel M D OliveiraJoint School of Nanoscience and Nanoengineering, North Carolina A&T State University, Greensboro, North Carolina, USA.
Andre S RibeiroFaculty of Medicine and Health Technology, Tampere University, Tampere, Finland.ORCID 0000-0002-7255-5211

Funding

Jane ja Aatos Erkon Säätiö (J&AE) 10-10524-38Opetushallitus (EDUFI) TM-21-11655Sigrid Juséliuksen Säätiö (Sigrid Jusélius Stiftelse) 230181Suomalainen Tiedeakatemia (Finnish Academy of Science and Letters)Suomen Kulttuurirahasto (SKR) 00222452, 00212591
6 · The paper itself

Abstract

The topology of the transcription factor network (TFN) of

Indexed as

Escherichia coliGene Expression Regulation, BacterialGene LibraryGenes, ReporterGreen Fluorescent ProteinsEscherichia coli ProteinsPlasmidsPromoter Regions, GeneticTranscription FactorsEscherichia coli ProteinsGreen Fluorescent ProteinsTranscription Factorsfluorescent proteinsglobal regulators of gene expressionnative promotersstrain librarysynthetic single-copy plasmidstranscriptional reporters

Identifiers

PMID38687030
PMCPMC11237500

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.