Evidence map›Paper›PMID 38685060›Full record

ArticleBMC medical genomics2024

Predictive significance of glycolysis-associated lncRNA profiles in colorectal cancer progression.

Rui Mao, Chenxin Xu, Quanzheng Zhang, Zheng Wang, Yanjun Liu, Yurui Peng, Ming Li

Open access · goldAbstract read
In one paragraph

Article in BMC medical genomics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. NImmunity, inflammation and disease · 2024
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 1 country.

Rui Mao *Hunan Key Laboratory of Aging Biology, Xiangya Hospital, Central South University, Changsha, China.
Chenxin Xu *Center of Gastrointestinal and Minimally Invasive Surgery, Department of General Surgery, The Second Affiliated Hospital of Chengdu, The Third People's Hospital of Chengdu, Affiliated Hospital of Southwest Jiaotong University, Chongqing Medical University, NO.82 Qinglong Road, Chengdu, Sichuan, 610031, China.
Quanzheng Zhang *Department of Critical Care Medicine, Chengdu Third People's Hospital, Chengdu, 610031, China.
Zheng WangDepartment of Colorectal Surgery, National Clinical Research Center for Cancer, Cancer Hospital, National Cancer Center, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, China.
Yanjun LiuCenter of Gastrointestinal and Minimally Invasive Surgery, Department of General Surgery, The Second Affiliated Hospital of Chengdu, The Third People's Hospital of Chengdu, Affiliated Hospital of Southwest Jiaotong University, Chongqing Medical University, NO.82 Qinglong Road, Chengdu, Sichuan, 610031, China. liuyanjun_001@163.com.
Yurui PengCenter of Gastrointestinal and Minimally Invasive Surgery, Department of General Surgery, The Second Affiliated Hospital of Chengdu, The Third People's Hospital of Chengdu, Affiliated Hospital of Southwest Jiaotong University, Chongqing Medical University, NO.82 Qinglong Road, Chengdu, Sichuan, 610031, China. 2232554370@qq.com.
Ming LiDepartment of hepatobiliary surgery, The Second Affiliated Hospital of Chengdu, The Third People's Hospital of Chengdu, Affiliated Hospital of Southwest Jiaotong University, Chongqing Medical University, NO.82 Qinglong Road, Chengdu, Sichuan, 610031, China. docliming0818@163.com.
Chengdu Third People's Hospital · CNCentral South University · CNChinese Academy of Medical Sciences & Peking Union Medical College · CNChongqing Medical University · CNSouthwest Jiaotong University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe Warburg effect is a hallmark characteristic of colorectal cancer (CRC). Despite extensive research, the role of long non-coding RNAs (lncRNAs) in influencing the Warburg effect remains incompletely understood. Our study aims to identify lncRNAs that may modulate the Warburg effect by functioning as competing endogenous RNAs (ceRNAs).

methodsUtilizing bioinformatics approaches, we extracted glycolysis-associated gene data from the Kyoto Encyclopedia of Genes and Genomes (KEGG) and identified 101 glycolysis-related lncRNAs in CRC. We employed Univariable Cox regression, Least Absolute Shrinkage and Selection Operator (LASSO) regression analysis, and Multivariable Cox regression to develop a prognostic model comprising four glycolysis-linked lncRNAs. We then constructed a prognostic nomogram integrating this lncRNA model with other relevant clinical parameters.

resultsThe prognostic efficacy of our four-lncRNA signature and its associated nomogram was validated in both training and validation cohorts. Functional assays demonstrated significant glycolysis and hexokinase II (HK2) inhibition following the silencing of RUNDC3A - AS1, a key lncRNA in our prognostic signature, highlighting its regulatory importance in the Warburg effect.

conclusionsOur research illuminates the critical role of glycolysis-centric lncRNAs in CRC. The developed prognostic model and nomogram underscore the pivotal prognostic and regulatory significance of the lncRNA RUNDC3A - AS1 in the Warburg effect in colorectal cancer.

Indexed as

Colorectal NeoplasmsDisease ProgressionGlycolysisRNA, Long NoncodingBiomarkers, TumorFemaleGene Expression ProfilingGene Expression Regulation, NeoplasticHexokinaseHumansMaleNomogramsPrognosisBiomarkers, TumorHexokinaseRNA, Long NoncodingColorectal cancerlncRNANomogramPrognostic signatureWarburg effect

Identifiers

PMID38685060
PMCPMC11057184
OpenAlexW4396221588

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.