Evidence map›Paper›PMID 38684940›Full record

ArticleBMC plant biology2024

Genome-wide identification of Aux/IAA gene family in white clover (Trifolium repens L.) and functional verification of TrIAA18 under different abiotic stress.

Tiangang Qi, Weiqiang Yang, Muhammad Jawad Hassan, Jiefang Liu, Yujiao Yang, Qinyu Zhou, Hang Li, Yan Peng

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
6.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

  1. Genome-wide unraveling of theFrontiers in plant science · 2026
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  4. The White Clover Single-Copy Nuclear GenePlants (Basel, Switzerland) · 2024
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Tiangang Qi *College of Grassland Science and Technology, Sichuan Agricultural University, Chengdu, 611130, China.
Weiqiang Yang *College of Grassland Science and Technology, Sichuan Agricultural University, Chengdu, 611130, China.
Muhammad Jawad HassanCollege of Grassland Science and Technology, Sichuan Agricultural University, Chengdu, 611130, China.
Jiefang LiuCollege of Grassland Science and Technology, Sichuan Agricultural University, Chengdu, 611130, China.
Yujiao YangCollege of Grassland Science and Technology, Sichuan Agricultural University, Chengdu, 611130, China.
Qinyu ZhouCollege of Grassland Science and Technology, Sichuan Agricultural University, Chengdu, 611130, China.
Hang LiCollege of Grassland Science and Technology, Sichuan Agricultural University, Chengdu, 611130, China.
Yan PengCollege of Grassland Science and Technology, Sichuan Agricultural University, Chengdu, 611130, China. pengyanlee@163.com.
Sichuan Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundWhite clover (Trifolium repens L.) is an excellent leguminous cool-season forage with a high protein content and strong nitrogen-fixing ability. Despite these advantages, its growth and development are markedly sensitive to environmental factors. Indole-3-acetic acid (IAA) is the major growth hormone in plants, regulating plant growth, development, and response to adversity. Nevertheless, the specific regulatory functions of Aux/IAA genes in response to abiotic stresses in white clover remain largely unexplored.

resultsIn this study, we identified 47 Aux/IAA genes in the white clover genome, which were categorized into five groups based on phylogenetic analysis. The TrIAAs promoter region co-existed with different cis-regulatory elements involved in developmental and hormonal regulation, and stress responses, which may be closely related to their diverse regulatory roles. Collinearity analysis showed that the amplification of the TrIAA gene family was mainly carried out by segmental duplication. White clover Aux/IAA genes showed different expression patterns in different tissues and under different stress treatments. In addition, we performed a yeast two-hybrid analysis to investigate the interaction between white clover Aux/IAA and ARF proteins. Heterologous expression indicated that TrIAA18 could enhance stress tolerance in both yeast and transgenic Arabidopsis thaliana.

conclusionThese findings provide new scientific insights into the molecular mechanisms of growth hormone signaling in white clover and its functional characteristics in response to environmental stress.

Indexed as

Indoleacetic AcidsPhylogenyPlant ProteinsStress, PhysiologicalTrifoliumGene Expression Regulation, PlantGenes, PlantGenome, PlantMultigene FamilyPlant Growth RegulatorsPromoter Regions, Geneticindoleacetic acidIndoleacetic AcidsPlant Growth RegulatorsPlant ProteinsAbiotic stress responseFunctional verificationIAA gene familyWhite clover

Identifiers

PMID38684940
PMCPMC11057079
OpenAlexW4396228656

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.