Evidence map›Paper›PMID 38684863›Full record

ArticleEMBO molecular medicine2024

Inhibition of asparagine synthetase effectively retards polycystic kidney disease progression.

Sara Clerici, Christine Podrini, Davide Stefanoni, Gianfranco Distefano, Laura Cassina, Maria Elena Steidl, Laura Tronci, Tamara Canu, Marco Chiaravalli, Daniel Spies and 7 more

Abstract read
In one paragraph

Article in EMBO molecular medicine, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Glutamine metabolism in health and disease.Signal transduction and targeted therapy · 2026
    Review
  2. Review
  3. Review
  4. Article
  5. Review
  6. Article
  7. Review
  8. RNA-Based Therapies in Kidney Diseases.Journal of inflammation research · 2025
    Review
  9. Targeting Metabolic Reprogramming in Polycystic Kidney Disease.Journal of the American Society of Nephrology : JASN · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Sara Clerici *Molecular Basis of Cystic Kidney Disorders Unit, Division of Genetics and Cell Biology, IRCCS, San Raffaele Scientific Institute, Milan, Italy.ORCID http://orcid.org/0000-0002-3911-9944
Christine Podrini *Molecular Basis of Cystic Kidney Disorders Unit, Division of Genetics and Cell Biology, IRCCS, San Raffaele Scientific Institute, Milan, Italy.ORCID http://orcid.org/0000-0002-5391-3378
Davide StefanoniMolecular Basis of Cystic Kidney Disorders Unit, Division of Genetics and Cell Biology, IRCCS, San Raffaele Scientific Institute, Milan, Italy.ORCID http://orcid.org/0000-0002-7756-6788
Gianfranco DistefanoMolecular Basis of Cystic Kidney Disorders Unit, Division of Genetics and Cell Biology, IRCCS, San Raffaele Scientific Institute, Milan, Italy.
Laura CassinaMolecular Basis of Cystic Kidney Disorders Unit, Division of Genetics and Cell Biology, IRCCS, San Raffaele Scientific Institute, Milan, Italy.ORCID http://orcid.org/0000-0002-7350-3069
Maria Elena SteidlMolecular Basis of Cystic Kidney Disorders Unit, Division of Genetics and Cell Biology, IRCCS, San Raffaele Scientific Institute, Milan, Italy.
Laura TronciCogentech SRL Benefit Corporation, 20139, Milan, Italy.
Tamara CanuCenter for Experimental Imaging (CIS), IRCCS, San Raffaele Scientific Institute, Milan, Italy.ORCID http://orcid.org/0000-0002-4589-9377
Marco ChiaravalliMolecular Basis of Cystic Kidney Disorders Unit, Division of Genetics and Cell Biology, IRCCS, San Raffaele Scientific Institute, Milan, Italy.
Daniel SpiesMolecular Basis of Cystic Kidney Disorders Unit, Division of Genetics and Cell Biology, IRCCS, San Raffaele Scientific Institute, Milan, Italy.
Thomas A BellIonis Pharmaceuticals, Carlsbad, CA, USA.
Ana Sh CostaMRC, Cancer Unit Cambridge, University of Cambridge, Hutchison/MRC Research Centre, Box 197, Cambridge Biomedical Campus, Cambridge, CB2 0XZ, UK.
Antonio EspositoCenter for Experimental Imaging (CIS), IRCCS, San Raffaele Scientific Institute, Milan, Italy.
Angelo D'AlessandroDepartment of Biochemistry and Molecular Genetics, University of Colorado Denver, Aurora, CO, USA.ORCID http://orcid.org/0000-0002-2258-6490
Christian FrezzaFaculty of Medicine and University Hospital Cologne, Faculty of Mathematics and Natural Sciences, Cluster of Excellence Cellular Stress Responses in Aging-associated Diseases (CECAD), Joseph-Stelzmann-Str. 26-50931, Cologne, Germany.ORCID http://orcid.org/0000-0002-3293-7397
Angela BachiIFOM ETS The AIRC Institute of Molecular Oncology, Milan, Italy.ORCID http://orcid.org/0000-0003-4842-6556
Alessandra BolettaMolecular Basis of Cystic Kidney Disorders Unit, Division of Genetics and Cell Biology, IRCCS, San Raffaele Scientific Institute, Milan, Italy. boletta.alessandra@hsr.it.ORCID http://orcid.org/0000-0002-4704-4006

Funding

Fondazione AIRC per la ricerca sul cancro ETS (AIRC) IG2019-23513Italy Ministry of Health | Agenzia Italiana del Farmaco, Ministero della Salute (AIFA) GR-2016-02364851Italy Ministry of Health | Agenzia Italiana del Farmaco, Ministero della Salute (AIFA) RF-2018-12368254
6 · The paper itself

Abstract

Polycystic kidney disease (PKD) is a genetic disorder characterized by bilateral cyst formation. We showed that PKD cells and kidneys display metabolic alterations, including the Warburg effect and glutaminolysis, sustained in vitro by the enzyme asparagine synthetase (ASNS). Here, we used antisense oligonucleotides (ASO) against Asns in orthologous and slowly progressive PKD murine models and show that treatment leads to a drastic reduction of total kidney volume (measured by MRI) and a prominent rescue of renal function in the mouse. Mechanistically, the upregulation of an ATF4-ASNS axis in PKD is driven by the amino acid response (AAR) branch of the integrated stress response (ISR). Metabolic profiling of PKD or control kidneys treated with Asns-ASO or Scr-ASO revealed major changes in the mutants, several of which are rescued by Asns silencing in vivo. Indeed, ASNS drives glutamine-dependent de novo pyrimidine synthesis and proliferation in cystic epithelia. Notably, while several metabolic pathways were completely corrected by Asns-ASO, glycolysis was only partially restored. Accordingly, combining the glycolytic inhibitor 2DG with Asns-ASO further improved efficacy. Our studies identify a new therapeutic target and novel metabolic vulnerabilities in PKD.

Indexed as

Aspartate-Ammonia LigaseDisease Models, AnimalPolycystic Kidney DiseasesAnimalsDisease ProgressionHumansKidneyMiceOligonucleotides, AntisenseAspartate-Ammonia LigaseOligonucleotides, AntisenseADPKDAntisense OligonucleotidesGlutamine MetabolismGlycolysisMetabolic Reprogramming

Identifiers

PMID38684863
PMCPMC11178866

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.