Evidence map›Paper›PMID 38684000›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2024

Engineering tertiary chirality in helical biopolymers.

Jordan Janowski, Van A B Pham, Simon Vecchioni, Karol Woloszyn, Brandon Lu, Yijia Zou, Betel Erkalo, Lara Perren, Joe Rueb, Jesse Madnick and 5 more

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Jordan Janowski *Department of Chemistry, New York University, New York, NY 10003.
Van A B Pham *Department of Mathematics and Statistics, University of South Florida, Tampa, FL 33620.ORCID 0000-0001-5074-7303
Simon Vecchioni *Department of Chemistry, New York University, New York, NY 10003.ORCID 0000-0001-8243-650X
Karol WoloszynDepartment of Chemistry, New York University, New York, NY 10003.
Brandon LuDepartment of Chemistry, New York University, New York, NY 10003.ORCID 0000-0001-6424-2197
Yijia ZouDepartment of Chemistry, New York University, New York, NY 10003.
Betel ErkaloDepartment of Chemistry, New York University, New York, NY 10003.
Lara PerrenDepartment of Chemistry, New York University, New York, NY 10003.ORCID 0000-0001-9169-1780
Joe RuebDepartment of Chemistry, New York University, New York, NY 10003.
Jesse MadnickDepartment of Mathematics, University of Oregon, Eugene, OR 97403.ORCID 0000-0003-1026-8409
Chengde MaoDepartment of Chemistry, Purdue University, West Lafayette, IN 47907.ORCID 0000-0001-7516-8666
Masahico SaitoDepartment of Mathematics and Statistics, University of South Florida, Tampa, FL 33620.ORCID 0000-0003-0795-8548
Yoel P OhayonDepartment of Chemistry, New York University, New York, NY 10003.ORCID 0000-0001-7500-4282
Nataša JonoskaDepartment of Mathematics and Statistics, University of South Florida, Tampa, FL 33620.
Ruojie ShaDepartment of Chemistry, New York University, New York, NY 10003.ORCID 0000-0002-0807-734X

Funding

DOD | USN | ONR | U.S. Naval Research Laboratory (NRL) N000141912596National Science Foundation (NSF) CCF-2107267National Science Foundation (NSF) CCF-2107393U.S. Department of Energy (DOE) DE-SC0007991
6 · The paper itself

Abstract

Tertiary chirality describes the handedness of supramolecular assemblies and relies not only on the primary and secondary structures of the building blocks but also on topological driving forces that have been sparsely characterized. Helical biopolymers, especially DNA, have been extensively investigated as they possess intrinsic chirality that determines the optical, mechanical, and physical properties of the ensuing material. Here, we employ the DNA tensegrity triangle as a model system to locate the tipping points in chirality inversion at the tertiary level by X-ray diffraction. We engineer tensegrity triangle crystals with incremental rotational steps between immobile junctions from 3 to 28 base pairs (bp). We construct a mathematical model that accurately predicts and explains the molecular configurations in both this work and previous studies. Our design framework is extendable to other supramolecular assemblies of helical biopolymers and can be used in the design of chiral nanomaterials, optically active molecules, and mesoporous frameworks, all of which are of interest to physical, biological, and chemical nanoscience.

Indexed as

DNABiopolymersModels, MolecularNucleic Acid ConformationStereoisomerismX-Ray DiffractionBiopolymersDNAchiralitycrystallographyDNA nanotechnologymathematical modelself-assembly

Identifiers

PMID38684000
PMCPMC11087804

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.