Evidence map›Paper›PMID 38683763›Full record

ArticlePLoS genetics2024

The impact of developmental stage, tissue type, and sex on DNA double-strand break repair in Drosophila melanogaster.

Elizabeth L Graham, Joel Fernandez, Shagun Gandhi, Iqra Choudhry, Natalia Kellam, Jeannine R LaRocque

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.5field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 2 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Elizabeth L GrahamDepartment of Human Science, School of Health, Georgetown University Medical Center, Washington, District of Columbia, United States of America.ORCID 0009-0006-2302-3506
Joel FernandezDepartment of Human Science, School of Health, Georgetown University Medical Center, Washington, District of Columbia, United States of America.
Shagun GandhiDepartment of Human Science, School of Health, Georgetown University Medical Center, Washington, District of Columbia, United States of America.ORCID 0009-0001-5893-9817
Iqra ChoudhryDepartment of Human Science, School of Health, Georgetown University Medical Center, Washington, District of Columbia, United States of America.ORCID 0009-0006-8105-4204
Natalia KellamDepartment of Human Science, School of Health, Georgetown University Medical Center, Washington, District of Columbia, United States of America.ORCID 0009-0008-2357-0619
Jeannine R LaRocqueDepartment of Human Science, School of Health, Georgetown University Medical Center, Washington, District of Columbia, United States of America.ORCID 0000-0002-1523-9677
Georgetown University · US

Funding

Mitotic DNA double-strand break repair in Drosophila melanogasterR15GM129628 · NIGMS · GEORGETOWN UNIVERSITY · PI LAROCQUE KAPPAS, JEANNINE · 2018 to 2018
$465k
NIGMS NIH HHS R15 GM129628
6 · The paper itself

Abstract

Accurate repair of DNA double-strand breaks (DSBs) is essential for the maintenance of genome integrity, as failure to repair DSBs can result in cell death. The cell has evolved two main mechanisms for DSB repair: non-homologous end-joining (NHEJ) and homology-directed repair (HDR), which includes single-strand annealing (SSA) and homologous recombination (HR). While certain factors like age and state of the chromatin are known to influence DSB repair pathway choice, the roles of developmental stage, tissue type, and sex have yet to be elucidated in multicellular organisms. To examine the influence of these factors, DSB repair in various embryonic developmental stages, larva, and adult tissues in Drosophila melanogaster was analyzed through molecular analysis of the DR-white assay using Tracking across Indels by DEcomposition (TIDE). The proportion of HR repair was highest in tissues that maintain the canonical (G1/S/G2/M) cell cycle and suppressed in both terminally differentiated and polyploid tissues. To determine the impact of sex on repair pathway choice, repair in different tissues in both males and females was analyzed. When molecularly examining tissues containing mostly somatic cells, males and females demonstrated similar proportions of HR and NHEJ. However, when DSB repair was analyzed in male and female premeiotic germline cells utilizing phenotypic analysis of the DR-white assay, there was a significant decrease in HR in females compared to males. This study describes the impact of development, tissue-specific cycling profile, and, in some cases, sex on DSB repair outcomes, underscoring the complexity of repair in multicellular organisms.

Indexed as

DNA Breaks, Double-StrandedDrosophila melanogasterAnimalsCell CycleDNA End-Joining RepairDNA RepairDrosophila ProteinsFemaleHomologous RecombinationMaleRecombinational DNA RepairDrosophila Proteins

Identifiers

PMID38683763
PMCPMC11057719
OpenAlexW4396216966

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.