Evidence map›Paper›PMID 38683244›Full record

ArticleApplied microbiology and biotechnology2024

Using multi-omics to explore the effect of Bacillus velezensis SAAS-63 on resisting nutrient stress in lettuce.

Yinshuang Bai, Ke Song, Mengxiang Gao, Juan Ma, Yifan Zhou, Hua Liu, Haijuan Zeng, Jinbin Wang, Xianqing Zheng

Open access · goldAbstract read
In one paragraph

Article in Applied microbiology and biotechnology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
5.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 9 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Yinshuang Bai *College of Life Sciences, Yangtze University, Jingzhou, 434025, China.
Ke Song *Key Laboratory of Agricultural Genetics and Breeding, The Biotechnology Research Institute, The Eco-Environmental Protection Research Institute, Shanghai Academy of Agricultural Sciences, Shanghai, 201106, China.
Mengxiang GaoCollege of Life Sciences, Yangtze University, Jingzhou, 434025, China.
Juan MaSchool of Life Science and Engineering, Lanzhou University of Technology, Lanzhou, 730050, China.
Yifan ZhouKey Laboratory of Agricultural Genetics and Breeding, The Biotechnology Research Institute, The Eco-Environmental Protection Research Institute, Shanghai Academy of Agricultural Sciences, Shanghai, 201106, China.
Hua LiuKey Laboratory of Agricultural Genetics and Breeding, The Biotechnology Research Institute, The Eco-Environmental Protection Research Institute, Shanghai Academy of Agricultural Sciences, Shanghai, 201106, China.
Haijuan ZengKey Laboratory of Agricultural Genetics and Breeding, The Biotechnology Research Institute, The Eco-Environmental Protection Research Institute, Shanghai Academy of Agricultural Sciences, Shanghai, 201106, China.
Jinbin WangCollege of Life Sciences, Yangtze University, Jingzhou, 434025, China. wangjinbin2013@126.com.ORCID http://orcid.org/0000-0001-7080-4264
Xianqing ZhengKey Laboratory of Agricultural Genetics and Breeding, The Biotechnology Research Institute, The Eco-Environmental Protection Research Institute, Shanghai Academy of Agricultural Sciences, Shanghai, 201106, China. zhengxianqing@saas.sh.cn.
Shanghai Academy of Agricultural Sciences · CNYangtze University · CNMinistry of Agriculture · EELanzhou University of Technology · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

To avoid the unreasonable use of chemical fertilizer, an environmentally friendly means of improving soil fertility is required. This study explored the role of the plant growth-promoting rhizosphere bacteria (PGPR) strain Bacillus velezensis SAAS-63 in improving nutrient stress in lettuce. Compared with no inoculation, B. velezensis SAAS-63 inoculants exhibited significantly increased fresh weight, root length, and shoot height under nutrient deficiency, as well as improved antioxidant activities and proline contents. The exogenous addition of B. velezensis SAAS-63 also significantly increased the accumulation of macroelements and micronutrients in lettuce. To elucidate the resistance mechanisms induced by B. velezensis SAAS-63 under nutrient stress, high-throughput sequencing and multi-omics analysis were performed. Inoculation with B. velezensis SAAS-63 altered the microbial community of the rhizosphere and increased the relative abundances of Streptomyces, Actinoallomurus, Verrucomicrobia, and Chloroflexi. It is worth noting that the inoculant SAAS-63 can affect plant rhizosphere metabolism. The inoculant changed the metabolic flow of phenylpropanoid metabolic pathway under nutrient deficiency and promoted phenylalanine to participate more in the synthesis of lignin precursors and coumarin substances by inhibiting the synthesis of flavone and isoflavone, thus improving plant resistance. This study showed that the addition of inoculant SAAS-63 could help plants recruit microorganisms to decompose and utilize trehalose and re-established the carbon metabolism of the plant rhizosphere. Additionally, microbes were found to be closely related to the accumulation of metabolites based on correlation analysis. The results indicated that the addition of PGPRs has an important role in regulating soil rhizosphere microbes and metabolism, providing valuable information for understanding how PGPRs affect complex biological processes and enhance plant adaptation to nutrient deficiency. KEY POINTS: • Inoculation with SAAS-63 significantly promoted plant growth under nutrient-deficient conditions • Inoculation with SAAS-63 affected rhizosphere microbial diversity and community structure • Inoculation with SAAS-63 affected plant rhizosphere metabolism and induced plants to synthesize substances that resist stress.

Indexed as

BacillusLactucaNutrientsRhizosphereSoil MicrobiologyStress, PhysiologicalMicrobiotaMultiomicsPlant RootsNutrientsCorrelationMetabolitesMicrobial community structureMicrobial diversityNutrient stressPGPR

Identifiers

PMID38683244
PMCPMC11058974
OpenAlexW4396219672

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.