Evidence map›Paper›PMID 38682900›Full record

ArticleeLife2024

Ribosome subunit attrition and activation of the p53-MDM4 axis dominate the response of MLL-rearranged cancer cells to WDR5 WIN site inhibition.

Gregory Caleb Howard, Jing Wang, Kristie L Rose, Camden Jones, Purvi Patel, Tina Tsui, Andrea C Florian, Logan Vlach, Shelly L Lorey, Brian C Grieb and 10 more

Open access · goldAbstract read
In one paragraph

Article in eLife, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 18 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Exosomes are specialized vehicles to induce fibronectin assembly.bioRxiv : the preprint server for biology · 2025
    Article
  10. Article
  11. Article
  12. Article
  13. Ribosome-directed cancer therapies: the tip of the iceberg?Trends in pharmacological sciences · 2025
    Review
  14. Article
  15. Expanded profiling of WD repeat domain 5 inhibitors reveals actionable strategies for the treatment of hematologic malignancies.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  16. Review
  17. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

20 authors at 2 institutions in 1 country.

Gregory Caleb HowardDepartment of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, United States.ORCID https://orcid.org/0000-0002-8373-4573
Jing WangDepartment of Biostatistics, Vanderbilt University Medical Center, Nashville, United States.
Kristie L RoseMass Spectrometry Research Center, Vanderbilt University School of Medicine, Nashville, United States.
Camden JonesDepartment of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, United States.
Purvi PatelMass Spectrometry Research Center, Vanderbilt University School of Medicine, Nashville, United States.
Tina TsuiMass Spectrometry Research Center, Vanderbilt University School of Medicine, Nashville, United States.
Andrea C FlorianDepartment of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, United States.
Logan VlachDepartment of Medicine, Vanderbilt University Medical Center, Nashville, United States.
Shelly L LoreyDepartment of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, United States.
Brian C GriebDepartment of Medicine, Vanderbilt University Medical Center, Nashville, United States.
Brianna N SmithDepartment of Medicine, Vanderbilt University Medical Center, Nashville, United States.
Macey J SlotaDepartment of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, United States.
Elizabeth M ReynoldsDepartment of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, United States.
Soumita GoswamiDepartment of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, United States.
Michael R SavonaDepartment of Medicine, Vanderbilt University Medical Center, Nashville, United States.
Frank M MasonDepartment of Medicine, Vanderbilt University Medical Center, Nashville, United States.ORCID https://orcid.org/0000-0003-1338-494X
Taekyu LeeDepartment of Biochemistry, Vanderbilt University School of Medicine, Nashville, United States.
Stephen FesikDepartment of Biochemistry, Vanderbilt University School of Medicine, Nashville, United States.
Qi LiuDepartment of Biostatistics, Vanderbilt University Medical Center, Nashville, United States.
William P TanseyDepartment of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, United States.ORCID https://orcid.org/0000-0002-3900-0978
Vanderbilt University · USVanderbilt University Medical Center · US

Funding

Tumor Immunology and Microenvironment Research ProgramP30CA068485 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI Ben Ho Park · 1995 to 2026
$172.8M
VANDERBILT UNIVERSITY CTSA FOR PEDIATRIC RESEARCHUL1RR024975 · NCRR · VANDERBILT UNIVERSITY · PI BERNARD, GORDON RAPHAEL · 2007 to 2011
$45.7M
Translational Analysis CoreP30DK058404 · NIDDK · VANDERBILT UNIVERSITY MEDICAL CENTER · PI MARY Kay WASHINGTON · 2002 to 2026
$29.9M
Shop Module CoreP30EY008126 · NEI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI David J. Calkins · 1989 to 2026
$19.6M
Vanderbilt Clinical Oncology Research Career Development ProgramK12CA090625 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI Debra L. Friedman, Paula Jill Hurley · 2001 to 2026
$16.9M
VANTAGE:Consolidation to create the Vanderbilt Technologies for Advanced GenomicsG20RR030956 · NCRR · VANDERBILT UNIVERSITY · PI PIETENPOL, JENNIFER A · 2010 to 2010
$8.7M
Integrated Biological Systems Training in OncologyT32CA119925 · NCI · VANDERBILT UNIVERSITY · PI Vivian Gama, William Patrick Tansey · 2008 to 2026
$7.6M
Facilitated recruitment of MYC to chromatin by interaction with WDR5R01CA200709 · NCI · VANDERBILT UNIVERSITY · PI TANSEY, WILLIAM PATRICK · 2016 to 2025
$3.9M
VOLT (Vanderbilt Oncology Training Program)T32CA217834 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI Debra L. Friedman, Douglas B Johnson · 2018 to 2026
$2.7M
WDR5 WIN Site Inhibition in Colorectal CancerF32CA268703 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI GRIEB, BRIAN C · 2022 to 2022
$80k
CCR NIH HHS HHSN261200800001CNCI NIH HHS F32 CA268703NCI NIH HHS HHSN261200800001ENCI NIH HHS K12 CA090625NCI NIH HHS P30 CA068485NCI NIH HHS R01 CA200709NCI NIH HHS T32 CA119925NCI NIH HHS T32 CA217834NCRR NIH HHS G20 RR030956NCRR NIH HHS UL1 RR024975NEI NIH HHS P30 EY008126NIDDK NIH HHS P30 DK058404NIH HHS CA200709NIH HHS CA217834NIH HHS CA268703NIH HHS HHSN261200800001E
6 · The paper itself

Abstract

The chromatin-associated protein WD Repeat Domain 5 (WDR5) is a promising target for cancer drug discovery, with most efforts blocking an arginine-binding cavity on the protein called the 'WIN' site that tethers WDR5 to chromatin. WIN site inhibitors (WINi) are active against multiple cancer cell types in vitro, the most notable of which are those derived from MLL-rearranged (MLLr) leukemias. Peptidomimetic WINi were originally proposed to inhibit MLLr cells via dysregulation of genes connected to hematopoietic stem cell expansion. Our discovery and interrogation of small-molecule WINi, however, revealed that they act in MLLr cell lines to suppress ribosome protein gene (RPG) transcription, induce nucleolar stress, and activate p53. Because there is no precedent for an anticancer strategy that specifically targets RPG expression, we took an integrated multi-omics approach to further interrogate the mechanism of action of WINi in human MLLr cancer cells. We show that WINi induce depletion of the stock of ribosomes, accompanied by a broad yet modest translational choke and changes in alternative mRNA splicing that inactivate the p53 antagonist MDM4. We also show that WINi are synergistic with agents including venetoclax and BET-bromodomain inhibitors. Together, these studies reinforce the concept that WINi are a novel type of ribosome-directed anticancer therapy and provide a resource to support their clinical implementation in MLLr leukemias and other malignancies.

Indexed as

Intracellular Signaling Peptides and ProteinsMyeloid-Lymphoid Leukemia ProteinNuclear ProteinsRibosomesTumor Suppressor Protein p53Antineoplastic AgentsCell Cycle ProteinsCell Line, TumorHistone-Lysine N-MethyltransferaseHumansPeptidomimeticsProto-Oncogene ProteinsAntineoplastic AgentsCell Cycle ProteinsHistone-Lysine N-MethyltransferaseIntracellular Signaling Peptides and ProteinsKMT2A protein, humanMDM4 protein, humanMyeloid-Lymphoid Leukemia ProteinNuclear ProteinsPeptidomimeticsProto-Oncogene ProteinsTP53 protein, humanTumor Suppressor Protein p53WDR5 protein, humancancer biologycancer therapychromosomesgene expressionhumanp53ribosomesWDR5

Identifiers

PMID38682900
PMCPMC11057873
OpenAlexW4387700981

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.