Evidence map›Paper›PMID 38682767›Full record

ArticleSkin research and technology : official journal of International Society for Bioengineering and the Skin (ISBS) [and] International Society for Digital Imaging of Skin (ISDIS) [and] International Society for Skin Imaging (ISSI)2024

miRSNP rs188493331: A key player in genetic control of microRNA-induced pathway activation in hypertrophic scars and keloids.

Meiqing Chen, Yuyan Pan, Zhiwei Chen, Fazhi Qi, Jianying Gu, Yangyang Qiu, Anqi He, Jiaqi Liu

Expression of concernAbstract read
In one paragraph

Article in Skin research and technology : official journal of International Society for Bioengineering and the Skin (ISBS) [and] International Society for Digital Imaging of Skin (ISDIS) [and] International Society for Skin Imaging (ISSI), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It carries an expression of concern. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. miRSNP rs188493331: A key player in genetic control of microRNA-induced pathway activation in hypertrophic scars and keloids.Skin research and technology : official journal of International Society for Bioengineering and the Skin (ISBS) [and] International Society for Digital Imaging of Skin (ISDIS) [and] International Society for Skin Imaging (ISSI) · 2024
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors.

Meiqing ChenDepartment of Dermatology, Zhongshan Hospital (Xiamen), Fudan University, Xiamen, China.
Yuyan PanDepartment of Plastic and Reconstructive Surgery, Zhongshan Hospital, Fudan University, Shanghai, China.
Zhiwei ChenBig Data and Artificial Intelligence Center, Zhongshan Hospital, Fudan University, Shanghai, China.
Fazhi QiDepartment of Plastic and Reconstructive Surgery, Zhongshan Hospital, Fudan University, Shanghai, China.
Jianying GuDepartment of Plastic and Reconstructive Surgery, Zhongshan Hospital, Fudan University, Shanghai, China.
Yangyang QiuDepartment of Dermatology, Zhongshan Hospital (Xiamen), Fudan University, Xiamen, China.
Anqi HeXiamen Clinical Research Center for Cancer Therapy, Zhongshan Hospital (Xiamen), Fudan University, Xiamen, China.
Jiaqi LiuDepartment of Plastic and Reconstructive Surgery, Zhongshan Hospital, Fudan University, Shanghai, China.ORCID https://orcid.org/0000-0003-1289-2782

Funding

National Natural Science Foundation of China #82102333Science and technology project of Health Commission of Fujian province #2020GGB061Science and technology project of Health Commission of Fujian province #2022J011418Xiamen medical and health guidance project #3502Z20194035Xiamen medical and health guidance project #3502Z20209042Xiamen medical and health guidance project #3502Z20209058Xiamen medical and health guidance project #3502Z20224ZD1073Xiamen medical and health guidance project #3502Z20224ZD1075
6 · The paper itself

Abstract

backgroundOur study aims to delineate the miRSNP-microRNA-gene-pathway interactions in the context of hypertrophic scars (HS) and keloids. MATERIALS AND

methodsWe performed a computational biology study involving differential expression analysis to identify genes and their mRNAs in HS and keloid tissues compared to normal skin, identifying key hub genes and enriching their functional roles, comprehensively analyzing microRNA-target genes and related signaling pathways through bioinformatics, identifying MiRSNPs, and constructing a pathway-based network to illustrate miRSNP-miRNA-gene-signaling pathway interactions.

resultsOur results revealed a total of 429 hub genes, with a strong enrichment in signaling pathways related to proteoglycans in cancer, focal adhesion, TGF-β, PI3K/Akt, and EGFR tyrosine kinase inhibitor resistance. Particularly noteworthy was the substantial crosstalk between the focal adhesion and PI3K/Akt signaling pathways, making them more susceptible to regulation by microRNAs. We also identified specific miRNAs, including miRNA-1279, miRNA-429, and miRNA-302e, which harbored multiple SNP loci, with miRSNPs rs188493331 and rs78979933 exerting control over a significant number of miRNA target genes. Furthermore, we observed that miRSNP rs188493331 shared a location with microRNA302e, microRNA202a-3p, and microRNA20b-5p, and these three microRNAs collectively targeted the gene LAMA3, which is integral to the focal adhesion signaling pathway.

conclusionsThe study successfully unveils the complex interactions between miRSNPs, miRNAs, genes, and signaling pathways, shedding light on the genetic factors contributing to HS and keloid formation.

Indexed as

Cicatrix, HypertrophicKeloidMicroRNAsComputational BiologyHumansPolymorphism, Single NucleotideSignal TransductionMicroRNAscomputational biologyhypertrophic scarkeloidmedical informaticsmicroRNAssingle nucleotide polymorphism

Identifiers

PMID38682767
PMCPMC11057055

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.