Evidence map›Paper›PMID 38681730›Full record

ArticleOpen life sciences2024

Transcriptome analysis of adipose tissue in grazing cattle: Identifying key regulators of fat metabolism.

Xia Qin, Xige He, Lu Chen, Yunfei Han, Yueying Yun, Jindi Wu, Lina Sha, Gerelt Borjigin

Abstract read
In one paragraph

Article in Open life sciences, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Xia QinCollege of Food Science and Engineering, Inner Mongolia Agricultural University, #306 Zhaowuda Road, Saihan District, Huhhot, Inner Mongolia 010018, China.
Xige HeCollege of Food Science and Engineering, Inner Mongolia Agricultural University, #306 Zhaowuda Road, Saihan District, Huhhot, Inner Mongolia 010018, China.
Lu ChenCollege of Food Science and Engineering, Inner Mongolia Agricultural University, #306 Zhaowuda Road, Saihan District, Huhhot, Inner Mongolia 010018, China.
Yunfei HanCollege of Food Science and Engineering, Inner Mongolia Agricultural University, #306 Zhaowuda Road, Saihan District, Huhhot, Inner Mongolia 010018, China.
Yueying YunCollege of Food Science and Engineering, Inner Mongolia Agricultural University, #306 Zhaowuda Road, Saihan District, Huhhot, Inner Mongolia 010018, China.
Jindi WuCollege of Food Science and Engineering, Inner Mongolia Agricultural University, #306 Zhaowuda Road, Saihan District, Huhhot, Inner Mongolia 010018, China.
Lina ShaCollege of Food Science and Engineering, Inner Mongolia Agricultural University, #306 Zhaowuda Road, Saihan District, Huhhot, Inner Mongolia 010018, China.
Gerelt BorjiginCollege of Food Science and Engineering, Inner Mongolia Agricultural University, #306 Zhaowuda Road, Saihan District, Huhhot, Inner Mongolia 010018, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The taste and tenderness of meat are the main determinants of carcass quality in many countries. This study aimed to discuss the mechanisms of intramuscular fat deposition in grazing and house-breeding cattle. We performed transcriptome analysis to characterize messenger RNA and microRNA (miRNA) expression profiles. A total of 456 and 66 differentially expressed genes (DEGs) and differentially expressed (DE) miRNAs were identified in the adipose tissue of grazing and house-breeding cattle. Kyoto Encyclopedia of Genes and Genomes pathway analysis identified the association of DEGs with fatty acid metabolism, fatty acid degradation, peroxisome proliferator-activated receptors signaling pathway, adenosine monophosphate-activated protein kinase signaling pathway, adipocytokine signaling pathway, and the association of DE miRNAs with mitogen-activated protein kinase signaling pathway. Apolipoprotein L domain containing 1, pyruvate dehydrogenase kinase 4, and sphingosine-1-phosphate lyase 1 genes may be the key regulators of fat metabolism in grazing cattle. Finally, we found that miR-211 and miR-331-5p were negatively correlated with the elongation of very long-chain fatty acids protein 6

Indexed as

adipose tissuegrazing cattlehouse breeding cattlemicroRNAtranscriptome analysis

Identifiers

PMID38681730
PMCPMC11049749

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.