Evidence map›Paper›PMID 38675933›Full record

ArticleViruses2024

High Prevalence of Hepatitis B Virus Drug Resistance Mutations to Lamivudine among People with HIV/HBV Coinfection in Rural and Peri-Urban Communities in Botswana.

Bonolo B Phinius, Motswedi Anderson, Irene Gobe, Margaret Mokomane, Wonderful T Choga, Basetsana Phakedi, Tsholofelo Ratsoma, Gorata Mpebe, Joseph Makhema, Roger Shapiro and 4 more

Open access · goldAbstract read
In one paragraph

Article in Viruses, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 3 countries.

Bonolo B PhiniusBotswana Harvard Health Partnership, Private Bag BO320, Gaborone, Botswana.ORCID 0000-0002-0180-2705
Motswedi AndersonBotswana Harvard Health Partnership, Private Bag BO320, Gaborone, Botswana.ORCID 0000-0001-9974-9684
Irene GobeSchool of Allied Health Professions, Faculty of Health Sciences, University of Botswana, Private Bag UB 0022, Gaborone, Botswana.
Margaret MokomaneSchool of Allied Health Professions, Faculty of Health Sciences, University of Botswana, Private Bag UB 0022, Gaborone, Botswana.
Wonderful T ChogaBotswana Harvard Health Partnership, Private Bag BO320, Gaborone, Botswana.ORCID 0000-0001-7606-0569
Basetsana PhakediBotswana Harvard Health Partnership, Private Bag BO320, Gaborone, Botswana.
Tsholofelo RatsomaBotswana Harvard Health Partnership, Private Bag BO320, Gaborone, Botswana.
Gorata MpebeBotswana Harvard Health Partnership, Private Bag BO320, Gaborone, Botswana.
Joseph MakhemaBotswana Harvard Health Partnership, Private Bag BO320, Gaborone, Botswana.
Roger ShapiroBotswana Harvard Health Partnership, Private Bag BO320, Gaborone, Botswana.
Shahin LockmanBotswana Harvard Health Partnership, Private Bag BO320, Gaborone, Botswana.
Rosemary MusondaBotswana Harvard Health Partnership, Private Bag BO320, Gaborone, Botswana.
Sikhulile MoyoBotswana Harvard Health Partnership, Private Bag BO320, Gaborone, Botswana.ORCID 0000-0003-3821-4592
Simani GaseitsiweBotswana Harvard Health Partnership, Private Bag BO320, Gaborone, Botswana.
Botswana Harvard AIDS Institute Partnership · BWHarvard University · USUniversity of Botswana · BW

Funding

H3ABioNet: a sustainable African Bioinformatics Network for H3AfricaU41HG006941 · NHGRI · UNIVERSITY OF CAPE TOWN · PI MULDER, NICOLA · 2012 to 2017
$14.8M
Training in HIV Genomics, Treatment, and Cure Research in BotswanaD43TW009610 · FIC · THE BOTSWANA HARVARD HEALTH PARTNERSHIP · PI SHAHIN LOCKMAN, Joseph Moeketsi Makhema · 2013 to 2026
$4.4M
Mentoring in Patient-Oriented HIV Research in the Era of Universal ARTK24AI131928 · NIAID · BRIGHAM AND WOMEN'S HOSPITAL · PI SHAHIN LOCKMAN · 2017 to 2026
$1.9M
Expansion of research and mentoring to improve birth outcomes and treatment outcomes among HIV-affected children in BotswanaK24AI131924 · NIAID · HARVARD UNIVERSITY D/B/A HARVARD SCHOOL OF PUBLIC HEALTH · PI Roger L Shapiro · 2018 to 2026
$1.6M
Viral Diversity an Innovative Biomarker for Refining Estimates of HIV IncidenceK43TW012350 · FIC · THE BOTSWANA HARVARD HEALTH PARTNERSHIP · PI Sikhulile Moyo · 2022 to 2026
$682k
Developing Botswana Laboratory Capacity in HIV Genomics and HIV CureG11TW012503 · FIC · THE BOTSWANA HARVARD HEALTH PARTNERSHIP · PI GASEITSIWE, SIMANI · 2023 to 2025
$297k
FIC NIH HHS D43 TW009610FIC NIH HHS G11 TW012503FIC NIH HHS K43 TW012350Gates Foundation INV-033558NHGRI NIH HHS U41 HG006941NIAID NIH HHS K24 AI131924NIAID NIH HHS K24 AI131928NIH HHS 1G11TW012503-01NIH HHS D43 TW009610NIH HHS K24 AI131924NIH HHS K24 AI131928NIH HHS K43 TW012350NIH HHS U41HG006941Wellcome TrustWellcome Trust 218770/Z/19/Z
6 · The paper itself

Abstract

(1) Background: We aimed to determine the prevalence of hepatitis B virus (HBV) resistance-associated mutations (RAMs) in people with HBV and human immunodeficiency virus (HBV/HIV) in Botswana. (2) Methods: We sequenced HBV deoxyribonucleic acid (DNA) from participants with HBV/HIV from the Botswana Combination Prevention Project study (2013-2018) using the Oxford Nanopore GridION platform. Consensus sequences were analyzed for genotypic and mutational profiles. (3) Results: Overall, 98 HBV sequences had evaluable reverse transcriptase region coverage. The median participant age was 43 years (IQR: 37, 49) and 66/98 (67.4%) were female. Most participants, i.e., 86/98 (87.8%) had suppressed HIV viral load (VL). HBV RAMs were identified in 61/98 (62.2%) participants. Most RAMs were in positions 204 (60.3%), 180 (50.5%), and 173 (33.3%), mostly associated with lamivudine resistance. The triple mutations rtM204V/L180M/V173L were the most predominant (17/61 [27.9%]). Most participants (96.7%) with RAMs were on antiretroviral therapy for a median duration of 7.5 years (IQR: 4.8, 10.5). Approximately 27.9% (17/61) of participants with RAMs had undetectable HBV VL, 50.8% (31/61) had VL < 2000 IU/mL, and 13/61 (21.3%) had VL ≥ 2000 IU/mL. (4) Conclusions: The high prevalence of lamivudine RAMs discourages the use of ART regimens with 3TC as the only HBV-active drug in people with HIV/HBV.

Indexed as

CoinfectionDrug Resistance, ViralHepatitis BHepatitis B virusHIV InfectionsLamivudineMutationAdultAntiviral AgentsBotswanaFemaleGenotypeHumansMaleMiddle AgedPrevalenceAntiviral AgentsLamivudineAfricaBotswanadrug resistancehepatitis B viruspeople living with HIV

Identifiers

PMID38675933
PMCPMC11054684
OpenAlexW4394754098

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.