Evidence map›Paper›PMID 38674399›Full record

ArticleGenes2024

Transcriptomic Changes and Regulatory Networks Associated with Resistance to Mastitis in Xinjiang Brown Cattle.

Dan Wang, Haiyan Yang, Shengchao Ma, Tingting Liu, Mengjie Yan, Mingming Dong, Menghua Zhang, Tao Zhang, Xiaoxue Zhang, Lei Xu and 2 more

Open access · goldAbstract read
In one paragraph

Article in Genes, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Dan WangCollege of Animal Science, Xinjiang Agricultural University, Urumqi 830091, China.
Haiyan YangCollege of Animal Science and Technology, Northwest A&F University, Yangling, Xianyang 712100, China.
Shengchao MaCollege of Animal Science, Xinjiang Agricultural University, Urumqi 830091, China.
Tingting LiuCollege of Animal Science, Xinjiang Agricultural University, Urumqi 830091, China.
Mengjie YanCollege of Animal Science, Xinjiang Agricultural University, Urumqi 830091, China.
Mingming DongCollege of Animal Science, Xinjiang Agricultural University, Urumqi 830091, China.
Menghua ZhangCollege of Animal Science, Xinjiang Agricultural University, Urumqi 830091, China.
Tao ZhangCollege of Animal Science, Xinjiang Agricultural University, Urumqi 830091, China.
Xiaoxue ZhangCollege of Animal Science, Xinjiang Agricultural University, Urumqi 830091, China.
Lei XuCollege of Animal Science, Xinjiang Agricultural University, Urumqi 830091, China.
Xixia HuangCollege of Animal Science, Xinjiang Agricultural University, Urumqi 830091, China.
Hong ChenCollege of Animal Science and Technology, Northwest A&F University, Yangling, Xianyang 712100, China.ORCID 0000-0001-5528-3923
Xinjiang Agricultural University · CNNorthwest A&F University · CN

Funding

The National Key Research and Development Program no.2021YFD1200903The National Natural Science Foundation of China 31860630
6 · The paper itself

Abstract

Xinjiang brown cattle are highly resistant to disease and tolerant of roughage feeding. The identification of genes regulating mastitis resistance in Xinjiang brown cattle is a novel means of genetic improvement. In this study, the blood levels of IL-1β, IL-6, IL-10, TNF-α, and TGF-β in Xinjiang brown cattle with high and low somatic cell counts (SCCs) were investigated, showing that cytokine levels were higher in cattle with high SCCs. The peripheral blood transcriptomic profiles of healthy and mastitis-affected cattle were constructed by RNA-seq. Differential expression analysis identified 1632 differentially expressed mRNAs (DE-mRNAs), 1757 differentially expressed lncRNAs (DE-lncRNAs), and 23 differentially expressed circRNAs (DE-circRNAs), which were found to be enriched in key pathways such as PI3K/Akt, focal adhesion, and ECM-receptor interactions. Finally, ceRNA interaction networks were constructed using the differentially expressed genes and ceRNAs. It was found that keynote genes or mRNAs were also enriched in pathways such as PI3K-Akt, cholinergic synapses, cell adhesion molecules, ion binding, cytokine receptor activity, and peptide receptor activity, suggesting that the key genes and ncRNAs in the network may play an important role in the regulation of bovine mastitis.

Indexed as

Gene Regulatory NetworksMastitis, BovineTranscriptomeAnimalsCattleCytokinesDisease ResistanceFemaleGene Expression ProfilingRNA, Long NoncodingRNA, MessengerCytokinesRNA, Long NoncodingRNA, MessengerceRNA interaction networkmastitis resistanceRNA-seqXinjiang brown cattle

Identifiers

PMID38674399
PMCPMC11049461
OpenAlexW4394566931

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.