Evidence map›Paper›PMID 38672082›Full record

ArticleBiomedicines2024

Identification of Novel Tumor Pyroptosis-Related Antigens and Pyroptosis Subtypes for Developing mRNA Vaccines in Pancreatic Adenocarcinoma.

Qiaowei Lin, Li Liang, Qing Wang, Xiao Wang, Yang You, Yefei Rong, Yuhong Zhou, Xi Guo

Open access · goldAbstract read
In one paragraph

Article in Biomedicines, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed, 1 pooled it
1.2field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 1 synthesis or guideline pooled it, 5 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Review
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Qiaowei LinDepartment of General Surgery, Zhongshan Hospital, Fudan University, Shanghai 200032, China.
Li LiangMedical Oncology department of Xiamen Branch, Zhongshan Hospital, Fudan University, Xiamen 361015, China.ORCID 0000-0002-1694-380X
Qing WangDepartment of Medical Oncology, Zhongshan Hospital, Fudan University, Shanghai 200032, China.
Xiao WangDepartment of Medical Oncology, Zhongshan Hospital, Fudan University, Shanghai 200032, China.
Yang YouDepartment of Medical Oncology, Zhongshan Hospital, Fudan University, Shanghai 200032, China.
Yefei RongDepartment of General Surgery, Zhongshan Hospital, Fudan University, Shanghai 200032, China.
Yuhong ZhouDepartment of Medical Oncology, Zhongshan Hospital, Fudan University, Shanghai 200032, China.
Xi GuoDepartment of Medical Oncology, Zhongshan Hospital, Fudan University, Shanghai 200032, China.
Sun Yat-sen University · CN

Funding

Chinese Society of Clinical Oncology-Hutchison Whampoa Limited tumor research foundations Y-HH202101-0223
6 · The paper itself

Abstract

backgroundAs one of the important components of immunotherapies, mRNA vaccines have displayed promising clinical outcomes in solid tumors. Nonetheless, their efficacy remains unclear in pancreatic adenocarcinoma (PAAD). Given the interaction of pyroptosis with anticancer immunity, our study aims to identify pyroptosis-related antigens for mRNA vaccine development and discern eligible candidates for vaccination.

methodsUtilizing gene expression data from TCGA and ICGC, we integrated RNA-seq data and compared genetic alterations through cBioPortal. Differential gene expressions were integrated using GEPIA. Relationships between immune cell abundance and tumor antigens were analyzed and visualized via TIMER. WGCNA facilitated the clustering of pyroptosis-related genes, identification of hub genes, and pathway enrichment analyses. Pyroptosis landscape was depicted through graph learning-based dimensional reduction.

resultsFour overexpressed and mutant pyroptosis-related genes associated with poor prognosis were identified as potential antigens for mRNA vaccines in PAAD, including

conclusionsIn PAAD,

Indexed as

hub genesmRNA vaccinepancreatic adenocarcinomapyroptosis landscapepyroptosis subtype

Identifiers

PMID38672082
PMCPMC11048009
OpenAlexW4393139876

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.