Evidence map›Paper›PMID 38670976›Full record

ArticleNature communications2024

Identification of triacylglycerol remodeling mechanism to synthesize unusual fatty acid containing oils.

Prasad Parchuri, Sajina Bhandari, Abdul Azeez, Grace Chen, Kumiko Johnson, Jay Shockey, Andrei Smertenko, Philip D Bates

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed, 1 pooled it
8.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 1 synthesis or guideline pooled it, 29 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Prasad Parchuri *Institute of Biological Chemistry, Washington State University, Pullman, WA, 99164, USA.ORCID http://orcid.org/0000-0002-9648-7487
Sajina Bhandari *Institute of Biological Chemistry, Washington State University, Pullman, WA, 99164, USA.ORCID http://orcid.org/0000-0002-3971-3767
Abdul AzeezInstitute of Biological Chemistry, Washington State University, Pullman, WA, 99164, USA.ORCID http://orcid.org/0000-0002-2631-9496
Grace ChenUnited States Department of Agriculture, Agricultural Research Service, Western Regional Research Center, Albany, CA, 94710, USA.
Kumiko JohnsonUnited States Department of Agriculture, Agricultural Research Service, Western Regional Research Center, Albany, CA, 94710, USA.
Jay ShockeyUnited States Department of Agriculture, Agricultural Research Service, Southern Regional Research Center, New Orleans, 70124, LA, USA.ORCID http://orcid.org/0000-0002-5057-5457
Andrei SmertenkoInstitute of Biological Chemistry, Washington State University, Pullman, WA, 99164, USA.ORCID http://orcid.org/0000-0002-5078-4881
Philip D BatesInstitute of Biological Chemistry, Washington State University, Pullman, WA, 99164, USA. phil_bates@wsu.edu.ORCID http://orcid.org/0000-0002-1291-3363
Washington State University · USUnited States Department of Agriculture · USSouthern Regional Research Center · US

Funding

DOE | SC | Biological and Environmental Research (BER) DE-SC0023142NSF | BIO | Division of Molecular and Cellular Biosciences (MCB) 2242822United States Department of Agriculture | National Institute of Food and Agriculture (NIFA) 2020-67013-30899United States Department of Agriculture | National Institute of Food and Agriculture (NIFA) 2023-67013-39022
6 · The paper itself

Abstract

Typical plant membranes and storage lipids are comprised of five common fatty acids yet over 450 unusual fatty acids accumulate in seed oils of various plant species. Plant oils are important human and animal nutrients, while some unusual fatty acids such as hydroxylated fatty acids (HFA) are used in the chemical industry (lubricants, paints, polymers, cosmetics, etc.). Most unusual fatty acids are extracted from non-agronomic crops leading to high production costs. Attempts to engineer HFA into crops are unsuccessful due to bottlenecks in the overlapping pathways of oil and membrane lipid synthesis where HFA are not compatible. Physaria fendleri naturally overcomes these bottlenecks through a triacylglycerol (TAG) remodeling mechanism where HFA are incorporated into TAG after initial synthesis. TAG remodeling involves a unique TAG lipase and two diacylglycerol acyltransferases (DGAT) that are selective for different stereochemical and acyl-containing species of diacylglycerol within a synthesis, partial degradation, and resynthesis cycle. The TAG lipase interacts with DGAT1, localizes to the endoplasmic reticulum (with the DGATs) and to puncta around the lipid droplet, likely forming a TAG remodeling metabolon near the lipid droplet-ER junction. Each characterized DGAT and TAG lipase can increase HFA accumulation in engineered seed oils.

Indexed as

Diacylglycerol O-AcyltransferaseFatty AcidsPlant OilsTriglyceridesEndoplasmic ReticulumLipaseLipid DropletsPlant ProteinsPlants, Genetically ModifiedSeedsDiacylglycerol O-AcyltransferaseFatty AcidsLipasePlant OilsPlant ProteinsTriglycerides

Identifiers

PMID38670976
PMCPMC11053099
OpenAlexW4395685923

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.