Evidence map›Paper›PMID 38666987›Full record

ArticleAntibiotics (Basel, Switzerland)2024

Phylogeny of Transferable Oxazolidinone Resistance Genes and Homologs.

Gábor Kardos, Levente Laczkó, Eszter Kaszab, Bálint Timmer, Krisztina Szarka, Eszter Prépost, Krisztián Bányai

Open access · goldAbstract read
In one paragraph

Article in Antibiotics (Basel, Switzerland), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.2field-weighted citation impact, top 46% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 1 citations in OpenAlex.

  1. Article
  2. Molecular basis of linezolid resistance inAntimicrobial agents and chemotherapy · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Gábor KardosInstitute of Metagenomics, University of Debrecen, H-4032 Debrecen, Hungary.
Levente LaczkóOne Health Institute, Faculty of Health Sciences, University of Debrecen, H-4032 Debrecen, Hungary.ORCID 0000-0002-9379-7527
Eszter KaszabOne Health Institute, Faculty of Health Sciences, University of Debrecen, H-4032 Debrecen, Hungary.
Bálint TimmerInstitute of Metagenomics, University of Debrecen, H-4032 Debrecen, Hungary.
Krisztina SzarkaInstitute of Metagenomics, University of Debrecen, H-4032 Debrecen, Hungary.ORCID 0000-0002-7032-9659
Eszter PrépostDepartment of Health Industry, University of Debrecen, H-4032 Debrecen, Hungary.
Krisztián BányaiPathogen Discovery Group, HUN-REN Veterinary Medical Research Institute, H-1143 Budapest, Hungary.
University of Debrecen · HUNational Food Chain Safety Office · HU

Funding

Eötvös Loránd Research Network SA-27/2021GINOP GINOP-2.3.4-15-2020-00008National Research, Development and Innovation Office RRF-2.3.1-21-2022-00001National Research, Development and Innovation Office TKP2021-EGA-01National Research, Development and Innovation Office ÚNKP-20-4-I-DE-277
6 · The paper itself

Abstract

Oxazolidinone resistance, especially transmissible resistance, is a major public health concern, and the origin of this resistance mechanism is not yet resolved. This study aims to delve into the phylogenetic origin of the transmissible oxazolidinone resistance mechanisms conferring cross-resistance to other drugs of human and veterinary importance. The amino acid sequences of the five cfr ribosomal methylases and optrA and poxtA were used as queries in searches against 219,549 bacterial proteomes in the NCBI RefSeq database. Hits with >40% amino acid identity and >80% query coverage were aligned, and phylogenetic trees were reconstructed. All five cfr genes yielded highly similar trees, with rlmN housekeeping ribosomal methylases located basal to the sister groups of S-adenosyl-methionine-dependent methyltransferases from various Deltaproteobacteria and Actinomycetia, including antibiotic-producing

Indexed as

23S rRNAcfr methylaselinezolid resistancephenicol resistanceribosome methylation

Identifiers

PMID38666987
PMCPMC11047308
OpenAlexW4393279556

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.