Evidence map›Paper›PMID 38666975›Full record

ArticleAntibiotics (Basel, Switzerland)2024

Peptidome Profiling of

Rohit Kumar, Nikunj Tyagi, Anju Nagpal, Jai Kumar Kaushik, Ashok Kumar Mohanty, Sudarshan Kumar

Open access · goldAbstract read
In one paragraph

Article in Antibiotics (Basel, Switzerland), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.7field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Rohit KumarCell Biology and Proteomics Lab., Animal Biotechnology Centre, ICAR-National Dairy Research Institute, Karnal 132001, Haryana, India.ORCID 0000-0003-2454-7919
Nikunj TyagiCell Biology and Proteomics Lab., Animal Biotechnology Centre, ICAR-National Dairy Research Institute, Karnal 132001, Haryana, India.ORCID 0000-0002-4578-422X
Anju NagpalCell Biology and Proteomics Lab., Animal Biotechnology Centre, ICAR-National Dairy Research Institute, Karnal 132001, Haryana, India.
Jai Kumar KaushikCell Biology and Proteomics Lab., Animal Biotechnology Centre, ICAR-National Dairy Research Institute, Karnal 132001, Haryana, India.
Ashok Kumar MohantyICAR-Indian Veterinary Research Institute, Mukteshwar 263138, Uttarakhand, India.
Sudarshan KumarCell Biology and Proteomics Lab., Animal Biotechnology Centre, ICAR-National Dairy Research Institute, Karnal 132001, Haryana, India.ORCID 0000-0002-9816-4307
National Dairy Research Institute · INIndian Veterinary Research Institute · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Urinary proteins have been studied quite exhaustively in the past, however, the small sized peptides have remained neglected for a long time in dairy cattle. These peptides are the products of systemic protein turnover, which are excreted out of the body and hence can serve as an important biomarker for various pathophysiologies. These peptides in other species of bovine have been reported to possess several bioactive properties. To investigate the urinary peptides in buffalo and simultaneously their bioactivities, we generated a peptidome profile from the urine of Murrah Buffaloes (n = 10). Urine samples were processed using <10 kDa MWCO filter and filtrate obtained was used for peptide extraction using Solid Phase Extraction (SPE). The nLC-MS/MS of the aqueous phase from ten animals resulted in the identification of 8165 peptides originating from 6041 parent proteins. We further analyzed these peptide sequences to identify bioactive peptides and classify them into anti-cancerous, anti-hypertensive, anti-microbial, and anti-inflammatory groups with a special emphasis on antimicrobial properties. With this in mind, we simultaneously conducted experiments to evaluate the antimicrobial properties of urinary aqueous extract on three pathogenic bacterial strains:

Indexed as

antimicrobial peptidebioactive peptidesbuffalomass spectrometryproteasesurinary peptides

Identifiers

PMID38666975
PMCPMC11047597
OpenAlexW4393188310

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.