Evidence map›Paper›PMID 38666760›Full record

ArticlePharmacology research & perspectives2024

Pharmacogenetic variability of tuberculosis biomarkers in native and mestizo Peruvian populations.

Luis Jaramillo-Valverde, Kelly S Levano, David D Tarazona, Silvia Capristano, Cesar Sanchez, Julio A Poterico, Eduardo Tarazona-Santos, Heinner Guio

Open access · goldAbstract read
In one paragraph

Article in Pharmacology research & perspectives, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
2.3field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Luis Jaramillo-ValverdeLaboratorio de Biotecnología y Biología Molecular, Instituto Nacional de Salud, Lima, Peru.ORCID https://orcid.org/0000-0001-5093-6067
Kelly S LevanoLaboratorio de Biotecnología y Biología Molecular, Instituto Nacional de Salud, Lima, Peru.
David D TarazonaLaboratorio de Biotecnología y Biología Molecular, Instituto Nacional de Salud, Lima, Peru.
Silvia CapristanoLaboratorio de Biotecnología y Biología Molecular, Instituto Nacional de Salud, Lima, Peru.
Cesar SanchezLaboratorio de Biotecnología y Biología Molecular, Instituto Nacional de Salud, Lima, Peru.
Julio A PotericoINBIOMEDIC Research and Technological Center, Lima, Peru.
Eduardo Tarazona-SantosUniversidade Federal de Minas Gerais, Instituto de Ciências Biológicas, Departamento de Genética, Ecologia e Evolução, Belo Horizonte, Minas Gerais, Brazil.
Heinner GuioLaboratorio de Biotecnología y Biología Molecular, Instituto Nacional de Salud, Lima, Peru.ORCID https://orcid.org/0000-0003-0078-1188
Instituto Nacional de Salud · PEUniversidad de Huánuco · PEUniversidade Federal de Minas Gerais · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In Peru, 29 292 people were diagnosed with tuberculosis in 2022. Although tuberculosis treatments are effective, 3.4%-13% are associated with significant adverse drug reactions, with drug-induced liver injury (DILI) considered the most predominant. Among the first-line antituberculosis drugs, isoniazid is the main drug responsible for the appearance of DILI. In liver, isoniazid (INH) is metabolized by N-acetyltransferase-2 (NAT2) and cytochrome P450 2E1 (CYP2E1). Limited information exists on genetic risk factors associated with the presence of DILI to antituberculosis drugs in Latin America, and even less is known about these factors in the native and mestizo Peruvian population. The aim of this study was to determine the prevalence of NAT2 and CYP2E1 genotypes in native and mestizo population. An analytical cross-sectional analysis was performed using genetic data from mestizo population in Lima and native participants from south of Peru. NAT2 metabolizer was determined as fast, intermediate and slow, and CYP2E1 genotypes were classified as c1/c1, c1/c2 and c2/c2, from molecular tests and bioinformatic analyses. Of the 472 participants, 36 and 6 NAT2 haplotypes were identified in the mestizo and native population, respectively. In mestizo population, the most frequent NAT2*5B and NAT2*7B haplotypes were associated with DILI risk; while in natives, NAT2*5G and NAT2*13A haplotypes were associated with decreased risk of DILI. For CYP2E1, c1/c1 and c1/c2 genotypes are the most frequent in natives and mestizos, respectively. The linkage disequilibrium of NAT2 single nucleotide polymorphisms (SNPs) was estimated, detecting a block between all SNPs natives. In addition, a block between rs1801280 and rs1799929 for NAT2 was detected in mestizos. Despite the limitations of a secondary study, it was possible to report associations between NAT2 and CYP2E alleles with Peruvian native and mestizo by prevalence ratios. The results of this study will help the development of new therapeutic strategies for a Tuberculosis efficient control between populations.

Indexed as

Antitubercular AgentsArylamine N-AcetyltransferaseChemical and Drug Induced Liver InjuryCytochrome P-450 CYP2E1IsoniazidTuberculosisAdolescentAdultAgedBiomarkersCross-Sectional StudiesFemaleGenotypeHumansIndians, South AmericanMaleAntitubercular AgentsArylamine N-AcetyltransferaseBiomarkersCytochrome P-450 CYP2E1IsoniazidNAT2 protein, humangenotypenative and mestizo populationPharmacogenetictuberculosis

Identifiers

PMID38666760
PMCPMC11047445
OpenAlexW4395666670

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.